Transcript: ENST00000669386.1 ZNF594-DT-208

Description

ZNF594 divergent transcript [Source:HGNC Symbol;Acc:HGNC:55347]

Location

Chromosome 17: 5,192,027-5,235,995 forward strand.

About this transcript

This transcript has 6 exons and maps to 240 oligo probes.

Gene

This transcript is a product of gene ENSG00000261879.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000573772.4	ZNF594-DT-202	1044	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000663434.1	ZNF594-DT-206	2499	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000780153.1	ZNF594-DT-218	1905	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000780148.1	ZNF594-DT-213	1717	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000571689.1	ZNF594-DT-201	1715	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000649359.1	ZNF594-DT-204	1691	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000669386.1	ZNF594-DT-208	1640	No protein	-	lncRNA	-	-
ENST00000780147.1	ZNF594-DT-212	1404	No protein	-	lncRNA	-	-
ENST00000780152.1	ZNF594-DT-217	1243	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000667038.1	ZNF594-DT-207	1058	No protein	-	lncRNA	-	-
ENST00000780146.1	ZNF594-DT-211	1006	No protein	-	lncRNA	-	-
ENST00000671211.1	ZNF594-DT-209	946	No protein	-	lncRNA	-	-
ENST00000702138.2	ZNF594-DT-210	873	No protein	-	lncRNA	-	-
ENST00000656594.1	ZNF594-DT-205	789	No protein	-	lncRNA	-	-
ENST00000780156.1	ZNF594-DT-221	647	No protein	-	lncRNA	-	-
ENST00000780154.1	ZNF594-DT-219	601	No protein	-	lncRNA	-	-
ENST00000780155.1	ZNF594-DT-220	597	No protein	-	lncRNA	-	-
ENST00000780149.1	ZNF594-DT-214	563	No protein	-	lncRNA	-	-
ENST00000575601.5	ZNF594-DT-203	554	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000780151.1	ZNF594-DT-216	477	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000780150.1	ZNF594-DT-215	404	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 1,640 bps,

Version

ENST00000669386.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000669386.1 ZNF594-DT-208

Summary

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Transcript: ENST00000669386.1 ZNF594-DT-208

Summary

About Us

Get help

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