Transcript: ENST00000669192.1 LINC00667-236

Description

long intergenic non-protein coding RNA 667 [Source:HGNC Symbol;Acc:HGNC:27906]

Location

Chromosome 18: 5,238,778-5,243,963 forward strand.

About this transcript

This transcript has 4 exons and maps to 314 oligo probes.

Gene

This transcript is a product of gene ENSG00000263753.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000662359.2	LINC00667-223	1698	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000581471.3	LINC00667-204	9303	No protein	-	lncRNA	-	TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENST00000658607.1	LINC00667-217	6710	No protein	-	lncRNA	-	-
ENST00000670993.1	LINC00667-238	6188	No protein	-	lncRNA	-	-
ENST00000665272.1	LINC00667-229	5740	No protein	-	lncRNA	-	-
ENST00000657955.1	LINC00667-215	5155	No protein	-	lncRNA	-	-
ENST00000671289.1	LINC00667-239	5035	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000654021.1	LINC00667-209	4967	No protein	-	lncRNA	-	-
ENST00000668495.1	LINC00667-234	4729	No protein	-	lncRNA	-	-
ENST00000656810.1	LINC00667-212	4669	No protein	-	lncRNA	-	-
ENST00000665442.2	LINC00667-230	4599	No protein	-	lncRNA	-	-
ENST00000657250.1	LINC00667-214	4461	No protein	-	lncRNA	-	-
ENST00000665541.1	LINC00667-231	4455	No protein	-	lncRNA	-	-
ENST00000666950.2	LINC00667-233	4218	No protein	-	lncRNA	-	-
ENST00000660030.2	LINC00667-219	4212	No protein	-	lncRNA	-	-
ENST00000657129.2	LINC00667-213	4100	No protein	-	lncRNA	-	-
ENST00000577439.2	LINC00667-201	4075	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000582008.7	LINC00667-205	4020	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000662932.1	LINC00667-226	4017	No protein	-	lncRNA	-	-
ENST00000666552.1	LINC00667-232	3788	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000653507.2	LINC00667-207	3442	No protein	-	lncRNA	-	-
ENST00000658226.2	LINC00667-216	3313	No protein	-	lncRNA	-	-
ENST00000662415.1	LINC00667-224	3265	No protein	-	lncRNA	-	-
ENST00000813556.1	LINC00667-244	3073	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000664934.1	LINC00667-228	3058	No protein	-	lncRNA	-	-
ENST00000582363.1	LINC00667-206	2935	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000668807.2	LINC00667-235	2842	No protein	-	lncRNA	-	-
ENST00000691055.2	LINC00667-241	2584	No protein	-	lncRNA	-	-
ENST00000654155.2	LINC00667-210	2538	No protein	-	lncRNA	-	-
ENST00000655685.1	LINC00667-211	2363	No protein	-	lncRNA	-	-
ENST00000813566.1	LINC00667-254	1839	No protein	-	lncRNA	-	-
ENST00000658946.1	LINC00667-218	1775	No protein	-	lncRNA	-	-
ENST00000671312.1	LINC00667-240	1715	No protein	-	lncRNA	-	-
ENST00000669574.2	LINC00667-237	1620	No protein	-	lncRNA	-	-
ENST00000580684.7	LINC00667-203	1593	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000661829.1	LINC00667-222	1548	No protein	-	lncRNA	-	-
ENST00000662652.1	LINC00667-225	1518	No protein	-	lncRNA	-	-
ENST00000813557.1	LINC00667-245	1459	No protein	-	lncRNA	-	-
ENST00000813560.1	LINC00667-248	1448	No protein	-	lncRNA	-	-
ENST00000660561.1	LINC00667-220	1409	No protein	-	lncRNA	-	-
ENST00000813558.1	LINC00667-246	1382	No protein	-	lncRNA	-	-
ENST00000700949.2	LINC00667-243	1293	No protein	-	lncRNA	-	-
ENST00000813561.1	LINC00667-249	1271	No protein	-	lncRNA	-	-
ENST00000700921.2	LINC00667-242	1270	No protein	-	lncRNA	-	-
ENST00000813563.1	LINC00667-251	1258	No protein	-	lncRNA	-	-
ENST00000663393.1	LINC00667-227	1222	No protein	-	lncRNA	-	-
ENST00000813559.1	LINC00667-247	1210	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000813565.1	LINC00667-253	1207	No protein	-	lncRNA	-	-
ENST00000580082.4	LINC00667-202	1201	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000813562.1	LINC00667-250	1198	No protein	-	lncRNA	-	-
ENST00000813564.1	LINC00667-252	1167	No protein	-	lncRNA	-	-
ENST00000661357.1	LINC00667-221	1105	No protein	-	lncRNA	-	-
ENST00000669192.1	LINC00667-236	1053	No protein	-	lncRNA	-	-
ENST00000653571.1	LINC00667-208	837	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,053 bps,

Version

ENST00000669192.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000669192.1 LINC00667-236

Summary

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Transcript: ENST00000669192.1 LINC00667-236

Summary

About Us

Get help

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