Transcript: ENST00000668865.1 LINC03122-224

Description

long intergenic non-protein coding RNA 3122 [Source:HGNC Symbol;Acc:HGNC:26744]

Gene Synonyms

C5ORF64, FLJ37543, LINC03119

Location

Chromosome 5: 61,637,792-61,706,496 forward strand.

About this transcript

This transcript has 4 exons and maps to 212 oligo probes.

Gene

This transcript is a product of gene ENSG00000178722.17 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000502395.1	LINC03122-201	517	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000797193.1	LINC03122-243	1683	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000665180.1	LINC03122-215	5946	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000659478.1	LINC03122-213	5535	No protein	-	lncRNA	-	-
ENST00000666908.1	LINC03122-219	5095	No protein	-	lncRNA	-	-
ENST00000669536.1	LINC03122-225	4172	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000668566.1	LINC03122-222	3623	No protein	-	lncRNA	-	-
ENST00000667197.1	LINC03122-220	3441	No protein	-	lncRNA	-	-
ENST00000663605.1	LINC03122-214	3374	No protein	-	lncRNA	-	-
ENST00000668597.1	LINC03122-223	3368	No protein	-	lncRNA	-	-
ENST00000657803.1	LINC03122-209	3163	No protein	-	lncRNA	-	-
ENST00000659260.1	LINC03122-212	3107	No protein	-	lncRNA	-	-
ENST00000505642.6	LINC03122-202	3006	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000668865.1	LINC03122-224	2900	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000658355.1	LINC03122-210	2841	No protein	-	lncRNA	-	-
ENST00000671203.1	LINC03122-226	2588	No protein	-	lncRNA	-	-
ENST00000671321.1	LINC03122-227	2539	No protein	-	lncRNA	-	-
ENST00000656556.1	LINC03122-208	2362	No protein	-	lncRNA	-	-
ENST00000665322.1	LINC03122-216	2262	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000666004.1	LINC03122-217	2156	No protein	-	lncRNA	-	-
ENST00000510414.4	LINC03122-204	1979	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000668061.1	LINC03122-221	1901	No protein	-	lncRNA	-	-
ENST00000658416.1	LINC03122-211	1847	No protein	-	lncRNA	-	-
ENST00000797199.1	LINC03122-249	1807	No protein	-	lncRNA	-	-
ENST00000797202.1	LINC03122-252	1792	No protein	-	lncRNA	-	-
ENST00000797198.1	LINC03122-248	1743	No protein	-	lncRNA	-	-
ENST00000797195.1	LINC03122-245	1741	No protein	-	lncRNA	-	-
ENST00000797213.1	LINC03122-263	1739	No protein	-	lncRNA	-	-
ENST00000797212.1	LINC03122-262	1644	No protein	-	lncRNA	-	-
ENST00000797201.1	LINC03122-251	1636	No protein	-	lncRNA	-	-
ENST00000797194.1	LINC03122-244	1593	No protein	-	lncRNA	-	-
ENST00000654772.1	LINC03122-206	1470	No protein	-	lncRNA	-	-
ENST00000689803.1	LINC03122-230	1458	No protein	-	lncRNA	-	-
ENST00000797211.1	LINC03122-261	1415	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000666506.1	LINC03122-218	1342	No protein	-	lncRNA	-	-
ENST00000797200.1	LINC03122-250	1339	No protein	-	lncRNA	-	-
ENST00000693412.1	LINC03122-233	1329	No protein	-	lncRNA	-	-
ENST00000797216.1	LINC03122-266	1288	No protein	-	lncRNA	-	-
ENST00000690553.2	LINC03122-232	1275	No protein	-	lncRNA	-	-
ENST00000701581.2	LINC03122-236	1229	No protein	-	lncRNA	-	-
ENST00000689863.1	LINC03122-231	1221	No protein	-	lncRNA	-	-
ENST00000688469.1	LINC03122-229	1190	No protein	-	lncRNA	-	-
ENST00000797197.1	LINC03122-247	1176	No protein	-	lncRNA	-	-
ENST00000701704.1	LINC03122-237	1129	No protein	-	lncRNA	-	-
ENST00000701872.1	LINC03122-240	1114	No protein	-	lncRNA	-	-
ENST00000701966.2	LINC03122-241	1105	No protein	-	lncRNA	-	-
ENST00000797214.1	LINC03122-264	1101	No protein	-	lncRNA	-	-
ENST00000797205.1	LINC03122-255	1095	No protein	-	lncRNA	-	-
ENST00000655479.2	LINC03122-207	1076	No protein	-	lncRNA	-	-
ENST00000700868.1	LINC03122-234	1026	No protein	-	lncRNA	-	-
ENST00000797196.1	LINC03122-246	1006	No protein	-	lncRNA	-	-
ENST00000797225.1	LINC03122-275	1006	No protein	-	lncRNA	-	-
ENST00000701735.1	LINC03122-239	1005	No protein	-	lncRNA	-	-
ENST00000702088.1	LINC03122-242	999	No protein	-	lncRNA	-	-
ENST00000797203.1	LINC03122-253	939	No protein	-	lncRNA	-	-
ENST00000797224.1	LINC03122-274	897	No protein	-	lncRNA	-	-
ENST00000797207.1	LINC03122-257	887	No protein	-	lncRNA	-	-
ENST00000797221.1	LINC03122-271	865	No protein	-	lncRNA	-	-
ENST00000507461.2	LINC03122-203	845	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000797206.1	LINC03122-256	813	No protein	-	lncRNA	-	-
ENST00000797204.1	LINC03122-254	810	No protein	-	lncRNA	-	-
ENST00000797219.1	LINC03122-269	808	No protein	-	lncRNA	-	-
ENST00000701730.1	LINC03122-238	793	No protein	-	lncRNA	-	-
ENST00000797208.1	LINC03122-258	699	No protein	-	lncRNA	-	-
ENST00000701542.2	LINC03122-235	688	No protein	-	lncRNA	-	-
ENST00000797215.1	LINC03122-265	687	No protein	-	lncRNA	-	-
ENST00000797217.1	LINC03122-267	647	No protein	-	lncRNA	-	-
ENST00000797220.1	LINC03122-270	645	No protein	-	lncRNA	-	-
ENST00000797210.1	LINC03122-260	603	No protein	-	lncRNA	-	-
ENST00000511407.1	LINC03122-205	594	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000797218.1	LINC03122-268	593	No protein	-	lncRNA	-	-
ENST00000797209.1	LINC03122-259	541	No protein	-	lncRNA	-	-
ENST00000686160.1	LINC03122-228	465	No protein	-	lncRNA	-	-
ENST00000797222.1	LINC03122-272	458	No protein	-	lncRNA	-	-
ENST00000797223.1	LINC03122-273	341	No protein	-	lncRNA	-	-
ENST00000797226.1	LINC03122-276	200	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 2,900 bps,

Version

ENST00000668865.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000668865.1 LINC03122-224

Summary

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Transcript: ENST00000668865.1 LINC03122-224

Summary

About Us

Get help

Our sister sites

Follow us