Transcript: ENST00000668817.1 LINC01257-206

Description

long intergenic non-protein coding RNA 1257 [Source:HGNC Symbol;Acc:HGNC:26972]

Location

Chromosome 12: 131,207,536-131,212,367 forward strand.

About this transcript

This transcript has 3 exons and maps to 214 oligo probes.

Gene

This transcript is a product of gene ENSG00000204603.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000846080.1	LINC01257-207	687	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000376678.7	LINC01257-201	2480	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000654133.1	LINC01257-204	2402	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000668353.1	LINC01257-205	2319	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000653253.1	LINC01257-203	1977	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000536191.2	LINC01257-202	1915	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000668817.1	LINC01257-206	1676	No protein	-	lncRNA	-	-
ENST00000846086.1	LINC01257-213	1166	No protein	-	lncRNA	-	-
ENST00000846088.1	LINC01257-215	1140	No protein	-	lncRNA	-	-
ENST00000846082.1	LINC01257-209	998	No protein	-	lncRNA	-	-
ENST00000846087.1	LINC01257-214	946	No protein	-	lncRNA	-	-
ENST00000846081.1	LINC01257-208	756	No protein	-	lncRNA	-	-
ENST00000846085.1	LINC01257-212	659	No protein	-	lncRNA	-	-
ENST00000846084.1	LINC01257-211	518	No protein	-	lncRNA	-	-
ENST00000846083.1	LINC01257-210	425	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,676 bps,

Version

ENST00000668817.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000668817.1 LINC01257-206

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Transcript: ENST00000668817.1 LINC01257-206

Summary

About Us

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