Transcript: ENST00000668399.1 LINC02817-213

Description

long intergenic non-protein coding RNA 2817 [Source:HGNC Symbol;Acc:HGNC:32042]

Gene Synonyms

C1ORF140, FLJ46636

Location

Chromosome 1: 221,332,156-221,336,298 reverse strand.

About this transcript

This transcript has 2 exons and maps to 181 oligo probes.

Gene

This transcript is a product of gene ENSG00000234754.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000779986.1	LINC02817-215	784	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000439004.1	LINC02817-202	4340	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000668399.1	LINC02817-213	2266	No protein	-	lncRNA	-	-
ENST00000665847.1	LINC02817-211	2041	No protein	-	lncRNA	-	-
ENST00000779988.1	LINC02817-217	2032	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000660516.1	LINC02817-208	2016	No protein	-	lncRNA	-	-
ENST00000659256.1	LINC02817-206	1536	No protein	-	lncRNA	-	-
ENST00000656904.1	LINC02817-205	1469	No protein	-	lncRNA	-	-
ENST00000652927.1	LINC02817-203	1360	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000662740.1	LINC02817-209	1339	No protein	-	lncRNA	-	-
ENST00000660437.1	LINC02817-207	1288	No protein	-	lncRNA	-	-
ENST00000670872.1	LINC02817-214	1270	No protein	-	lncRNA	-	-
ENST00000666589.1	LINC02817-212	1223	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000434398.2	LINC02817-201	1157	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000653714.1	LINC02817-204	1124	No protein	-	lncRNA	-	-
ENST00000664578.1	LINC02817-210	1112	No protein	-	lncRNA	-	-
ENST00000779989.1	LINC02817-218	406	No protein	-	lncRNA	-	-
ENST00000779987.1	LINC02817-216	404	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 2,266 bps,

Version

ENST00000668399.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000668399.1 LINC02817-213

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENST00000668399.1 LINC02817-213

Summary

About Us

Get help

Our sister sites

Follow us