Transcript: ENST00000668228.1 LINC02882-214

Description

long intergenic non-protein coding RNA 2882 [Source:HGNC Symbol;Acc:HGNC:54802]

Gene Synonyms

RP11-81H3.2

Location

Chromosome 12: 74,199,575-74,377,611 reverse strand.

About this transcript

This transcript has 9 exons and maps to 224 oligo probes.

Gene

This transcript is a product of gene ENSG00000251138.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000663261.1	LINC02882-211	1517	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000668665.1	LINC02882-215	3857	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000670471.1	LINC02882-218	3720	No protein	-	lncRNA	-	-
ENST00000653134.1	LINC02882-206	2242	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000658677.1	LINC02882-208	2229	No protein	-	lncRNA	-	-
ENST00000548427.2	LINC02882-202	2095	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENST00000756774.1	LINC02882-236	1864	No protein	-	lncRNA	-	-
ENST00000716252.1	LINC02882-231	1541	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000716245.1	LINC02882-224	1474	No protein	-	lncRNA	-	-
ENST00000716249.1	LINC02882-228	1432	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000716241.1	LINC02882-220	1396	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000668228.1	LINC02882-214	1395	No protein	-	lncRNA	-	-
ENST00000665895.1	LINC02882-212	1378	No protein	-	lncRNA	-	-
ENST00000670573.1	LINC02882-219	1353	No protein	-	lncRNA	-	-
ENST00000716251.1	LINC02882-230	1345	No protein	-	lncRNA	-	-
ENST00000665907.1	LINC02882-213	1299	No protein	-	lncRNA	-	-
ENST00000669556.1	LINC02882-217	1294	No protein	-	lncRNA	-	-
ENST00000515416.8	LINC02882-201	1285	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000716250.1	LINC02882-229	1249	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000658833.1	LINC02882-209	1210	No protein	-	lncRNA	-	-
ENST00000662107.2	LINC02882-210	1186	No protein	-	lncRNA	-	-
ENST00000656876.1	LINC02882-207	1165	No protein	-	lncRNA	-	-
ENST00000551726.2	LINC02882-205	1121	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000716246.1	LINC02882-225	1119	No protein	-	lncRNA	-	-
ENST00000668997.1	LINC02882-216	1031	No protein	-	lncRNA	-	-
ENST00000756771.1	LINC02882-233	897	No protein	-	lncRNA	-	-
ENST00000716248.1	LINC02882-227	895	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000756777.1	LINC02882-239	888	No protein	-	lncRNA	-	-
ENST00000756772.1	LINC02882-234	822	No protein	-	lncRNA	-	-
ENST00000716247.1	LINC02882-226	808	No protein	-	lncRNA	-	-
ENST00000716243.1	LINC02882-222	790	No protein	-	lncRNA	-	-
ENST00000549905.5	LINC02882-203	748	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000716244.1	LINC02882-223	732	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000716242.1	LINC02882-221	730	No protein	-	lncRNA	-	-
ENST00000756773.1	LINC02882-235	688	No protein	-	lncRNA	-	-
ENST00000756778.1	LINC02882-240	678	No protein	-	lncRNA	-	-
ENST00000756780.1	LINC02882-242	619	No protein	-	lncRNA	-	-
ENST00000756776.1	LINC02882-238	598	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000551210.2	LINC02882-204	575	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000756775.1	LINC02882-237	540	No protein	-	lncRNA	-	-
ENST00000756779.1	LINC02882-241	497	No protein	-	lncRNA	-	-
ENST00000716253.1	LINC02882-232	496	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 9, Coding exons: 0, Transcript length: 1,395 bps,

Version

ENST00000668228.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000668228.1 LINC02882-214

Summary

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Transcript: ENST00000668228.1 LINC02882-214

Summary

About Us

Get help

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