Transcript: ENST00000668160.1 CASC17-210

Description

cancer susceptibility 17 [Source:HGNC Symbol;Acc:HGNC:43911]

Gene Synonyms

LINC00600

Location

Chromosome 17: 71,098,891-71,202,185 reverse strand.

About this transcript

This transcript has 5 exons and maps to 194 oligo probes.

Gene

This transcript is a product of gene ENSG00000260785.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000659670.1	CASC17-203	2096	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000569074.1	CASC17-201	2059	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000665992.1	CASC17-208	2022	No protein	-	lncRNA	-	-
ENST00000662323.1	CASC17-204	1418	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000659322.1	CASC17-202	1281	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000668920.1	CASC17-211	1162	No protein	-	lncRNA	-	-
ENST00000669182.1	CASC17-212	1151	No protein	-	lncRNA	-	-
ENST00000664372.1	CASC17-206	1079	No protein	-	lncRNA	-	-
ENST00000668160.1	CASC17-210	1025	No protein	-	lncRNA	-	-
ENST00000671130.1	CASC17-214	999	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000662349.1	CASC17-205	977	No protein	-	lncRNA	-	-
ENST00000669562.1	CASC17-213	940	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000667642.1	CASC17-209	937	No protein	-	lncRNA	-	-
ENST00000664398.1	CASC17-207	850	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 1,025 bps,

Version

ENST00000668160.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000668160.1 CASC17-210

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Transcript: ENST00000668160.1 CASC17-210

Summary

About Us

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