Transcript: ENST00000668140.1 LINC00507-219

Description

long intergenic non-protein coding RNA 507 [Source:HGNC Symbol;Acc:HGNC:43558]

Location

Chromosome 12: 127,947,624-127,950,927 forward strand.

About this transcript

This transcript has 2 exons and maps to 132 oligo probes.

Gene

This transcript is a product of gene ENSG00000256193.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000670753.1	LINC00507-225	971	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000653237.1	LINC00507-204	2290	No protein	-	lncRNA	-	-
ENST00000668140.1	LINC00507-219	2289	No protein	-	lncRNA	-	-
ENST00000667075.1	LINC00507-218	2137	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000542089.2	LINC00507-202	2104	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000654827.1	LINC00507-206	2070	No protein	-	lncRNA	-	-
ENST00000662793.1	LINC00507-215	2018	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000657939.1	LINC00507-211	2015	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000668801.1	LINC00507-220	2013	No protein	-	lncRNA	-	-
ENST00000653435.1	LINC00507-205	2010	No protein	-	lncRNA	-	-
ENST00000540882.6	LINC00507-201	1980	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000657270.1	LINC00507-209	1932	No protein	-	lncRNA	-	-
ENST00000544645.6	LINC00507-203	1925	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000659821.1	LINC00507-213	1919	No protein	-	lncRNA	-	-
ENST00000670117.1	LINC00507-222	1771	No protein	-	lncRNA	-	-
ENST00000658578.1	LINC00507-212	1710	No protein	-	lncRNA	-	-
ENST00000662200.1	LINC00507-214	1672	No protein	-	lncRNA	-	-
ENST00000656740.1	LINC00507-208	1668	No protein	-	lncRNA	-	-
ENST00000656701.1	LINC00507-207	1665	No protein	-	lncRNA	-	-
ENST00000666805.1	LINC00507-217	1481	No protein	-	lncRNA	-	-
ENST00000670551.1	LINC00507-224	1393	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000657743.1	LINC00507-210	1352	No protein	-	lncRNA	-	-
ENST00000670020.1	LINC00507-221	1152	No protein	-	lncRNA	-	-
ENST00000670359.1	LINC00507-223	1114	No protein	-	lncRNA	-	-
ENST00000671300.1	LINC00507-226	1095	No protein	-	lncRNA	-	-
ENST00000664297.1	LINC00507-216	808	No protein	-	lncRNA	-	-
ENST00000741522.1	LINC00507-227	337	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 2,289 bps,

Version

ENST00000668140.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000668140.1 LINC00507-219

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Transcript: ENST00000668140.1 LINC00507-219

Summary

About Us

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