Transcript: ENST00000667817.2 LINC02208-215

Description

long intergenic non-protein coding RNA 2208 [Source:HGNC Symbol;Acc:HGNC:52978]

Gene Synonyms

HRAT56

Location

Chromosome 5: 118,545,733-118,562,199 reverse strand.

About this transcript

This transcript has 3 exons and maps to 110 oligo probes.

Gene

This transcript is a product of gene ENSG00000250891.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000660173.1	LINC02208-208	1552	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000506769.2	LINC02208-201	2804	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000666092.2	LINC02208-214	1632	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000665746.1	LINC02208-213	1533	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000659234.1	LINC02208-206	1432	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000736430.1	LINC02208-220	1417	No protein	-	lncRNA	-	-
ENST00000654806.1	LINC02208-204	1352	No protein	-	lncRNA	-	-
ENST00000659881.1	LINC02208-207	1277	No protein	-	lncRNA	-	-
ENST00000653787.2	LINC02208-203	1263	No protein	-	lncRNA	-	-
ENST00000661749.1	LINC02208-211	1109	No protein	-	lncRNA	-	-
ENST00000736432.1	LINC02208-222	1068	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000736426.1	LINC02208-216	1049	No protein	-	lncRNA	-	-
ENST00000662796.1	LINC02208-212	998	No protein	-	lncRNA	-	-
ENST00000736427.1	LINC02208-217	897	No protein	-	lncRNA	-	-
ENST00000736431.1	LINC02208-221	860	No protein	-	lncRNA	-	-
ENST00000736434.1	LINC02208-224	815	No protein	-	lncRNA	-	-
ENST00000660915.3	LINC02208-209	798	No protein	-	lncRNA	-	-
ENST00000667817.2	LINC02208-215	789	No protein	-	lncRNA	-	-
ENST00000515704.1	LINC02208-202	718	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000736429.1	LINC02208-219	697	No protein	-	lncRNA	-	-
ENST00000661194.2	LINC02208-210	696	No protein	-	lncRNA	-	-
ENST00000736428.1	LINC02208-218	682	No protein	-	lncRNA	-	-
ENST00000736433.1	LINC02208-223	622	No protein	-	lncRNA	-	-
ENST00000655008.1	LINC02208-205	540	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 789 bps,

Version

ENST00000667817.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000667817.2 LINC02208-215

Summary

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Transcript: ENST00000667817.2 LINC02208-215

Summary

About Us

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