Transcript: ENST00000667785.1 LINC00841-209

Description

long intergenic non-protein coding RNA 841 [Source:HGNC Symbol;Acc:HGNC:27430]

Location

Chromosome 10: 43,909,296-43,914,506 forward strand.

About this transcript

This transcript has 4 exons and maps to 255 oligo probes.

Gene

This transcript is a product of gene ENSG00000233395.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000826345.1	LINC00841-211	597	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000451929.1	LINC00841-202	2126	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000660538.1	LINC00841-206	1235	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000654894.1	LINC00841-203	1197	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000657555.2	LINC00841-204	1135	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000670971.1	LINC00841-210	1099	No protein	-	lncRNA	-	-
ENST00000826360.1	LINC00841-226	1022	No protein	-	lncRNA	-	-
ENST00000667785.1	LINC00841-209	1020	No protein	-	lncRNA	-	-
ENST00000658736.2	LINC00841-205	995	No protein	-	lncRNA	-	-
ENST00000826348.1	LINC00841-214	979	No protein	-	lncRNA	-	-
ENST00000826347.1	LINC00841-213	935	No protein	-	lncRNA	-	-
ENST00000446107.2	LINC00841-201	839	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000826361.1	LINC00841-227	828	No protein	-	lncRNA	-	-
ENST00000826346.1	LINC00841-212	820	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000664261.1	LINC00841-207	819	No protein	-	lncRNA	-	-
ENST00000826353.1	LINC00841-219	814	No protein	-	lncRNA	-	-
ENST00000667054.1	LINC00841-208	728	No protein	-	lncRNA	-	-
ENST00000826359.1	LINC00841-225	687	No protein	-	lncRNA	-	-
ENST00000826349.1	LINC00841-215	617	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000826352.1	LINC00841-218	580	No protein	-	lncRNA	-	-
ENST00000826351.1	LINC00841-217	566	No protein	-	lncRNA	-	-
ENST00000826357.1	LINC00841-223	480	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000826358.1	LINC00841-224	453	No protein	-	lncRNA	-	-
ENST00000826355.1	LINC00841-221	421	No protein	-	lncRNA	-	-
ENST00000826356.1	LINC00841-222	400	No protein	-	lncRNA	-	-
ENST00000826354.1	LINC00841-220	391	No protein	-	lncRNA	-	-
ENST00000826350.1	LINC00841-216	347	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,020 bps,

Version

ENST00000667785.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000667785.1 LINC00841-209

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Transcript: ENST00000667785.1 LINC00841-209

Summary

About Us

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