Transcript: ENST00000667527.3 LINC01612-206

Description

long intergenic non-protein coding RNA 1612 [Source:HGNC Symbol;Acc:HGNC:51837]

Gene Synonyms

RP11-789C1.1, TCONS_00008319

Location

Chromosome 4: 170,226,496-170,284,885 forward strand.

About this transcript

This transcript has 3 exons, is associated with 24112 variant alleles and maps to 130 oligo probes.

Gene

This transcript is a product of gene ENSG00000250266.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000667527.3	LINC01612-206	2517	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000838829.1	LINC01612-207	2127	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000838832.1	LINC01612-210	1671	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000654867.2	LINC01612-202	1609	No protein	-	lncRNA	-	-
ENST00000665566.3	LINC01612-205	1470	No protein	-	lncRNA	-	-
ENST00000657650.1	LINC01612-203	1368	No protein	-	lncRNA	-	-
ENST00000660060.1	LINC01612-204	1366	No protein	-	lncRNA	-	-
ENST00000838831.1	LINC01612-209	1267	No protein	-	lncRNA	-	-
ENST00000838830.1	LINC01612-208	1143	No protein	-	lncRNA	-	-
ENST00000504509.2	LINC01612-201	1123	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000838833.1	LINC01612-211	951	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 2,517 bps,

Version

ENST00000667527.3

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.

Transcript: ENST00000667527.3 LINC01612-206

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Transcript: ENST00000667527.3 LINC01612-206

Summary

About Us

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