Transcript: ENST00000666722.2 LINC01524-255

Description

long intergenic non-protein coding RNA 1524 [Source:HGNC Symbol;Acc:HGNC:51228]

Location

Chromosome 20: 52,210,621-52,452,567 forward strand.

About this transcript

This transcript has 5 exons and maps to 138 oligo probes.

Gene

This transcript is a product of gene ENSG00000234948.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000716895.1	LINC01524-266	1641	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000428009.1	LINC01524-205	4390	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000663974.1	LINC01524-247	1992	No protein	-	lncRNA	-	-
ENST00000662129.1	LINC01524-238	1766	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000716896.1	LINC01524-267	1758	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000765388.1	LINC01524-268	1730	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000765391.1	LINC01524-271	1725	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000661784.2	LINC01524-237	1722	No protein	-	lncRNA	-	-
ENST00000659137.1	LINC01524-227	1647	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000662618.1	LINC01524-242	1644	No protein	-	lncRNA	-	-
ENST00000664050.1	LINC01524-248	1607	No protein	-	lncRNA	-	-
ENST00000661304.1	LINC01524-232	1547	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000656362.1	LINC01524-222	1533	No protein	-	lncRNA	-	-
ENST00000660314.1	LINC01524-229	1479	No protein	-	lncRNA	-	-
ENST00000666117.1	LINC01524-253	1463	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000653784.1	LINC01524-211	1431	No protein	-	lncRNA	-	-
ENST00000656040.1	LINC01524-219	1426	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000666751.1	LINC01524-256	1409	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000654945.1	LINC01524-212	1383	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000765422.1	LINC01524-302	1375	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000653245.1	LINC01524-210	1360	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000665687.1	LINC01524-251	1344	No protein	-	lncRNA	-	-
ENST00000670088.1	LINC01524-265	1344	No protein	-	lncRNA	-	-
ENST00000661421.1	LINC01524-234	1309	No protein	-	lncRNA	-	-
ENST00000669032.1	LINC01524-261	1293	No protein	-	lncRNA	-	-
ENST00000661530.1	LINC01524-235	1291	No protein	-	lncRNA	-	-
ENST00000655419.1	LINC01524-215	1291	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000666356.1	LINC01524-254	1239	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000765400.1	LINC01524-280	1207	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000669578.2	LINC01524-263	1145	No protein	-	lncRNA	-	-
ENST00000666070.1	LINC01524-252	1142	No protein	-	lncRNA	-	-
ENST00000765407.1	LINC01524-287	1133	No protein	-	lncRNA	-	-
ENST00000765394.1	LINC01524-274	1121	No protein	-	lncRNA	-	-
ENST00000668673.1	LINC01524-259	1120	No protein	-	lncRNA	-	-
ENST00000765399.1	LINC01524-279	1114	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000665561.1	LINC01524-250	1108	No protein	-	lncRNA	-	-
ENST00000656343.1	LINC01524-221	1084	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000425279.6	LINC01524-204	1058	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000765405.1	LINC01524-285	1054	No protein	-	lncRNA	-	-
ENST00000765401.1	LINC01524-281	1033	No protein	-	lncRNA	-	-
ENST00000765419.1	LINC01524-299	991	No protein	-	lncRNA	-	-
ENST00000765436.1	LINC01524-316	981	No protein	-	lncRNA	-	-
ENST00000661373.1	LINC01524-233	974	No protein	-	lncRNA	-	-
ENST00000667866.1	LINC01524-258	954	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000448013.6	LINC01524-207	950	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000656501.1	LINC01524-224	947	No protein	-	lncRNA	-	-
ENST00000663351.2	LINC01524-244	933	No protein	-	lncRNA	-	-
ENST00000765427.1	LINC01524-307	931	No protein	-	lncRNA	-	-
ENST00000663531.1	LINC01524-245	914	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000661770.1	LINC01524-236	906	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000660723.1	LINC01524-230	904	No protein	-	lncRNA	-	-
ENST00000765398.1	LINC01524-278	898	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000765414.1	LINC01524-294	898	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000765404.1	LINC01524-284	897	No protein	-	lncRNA	-	-
ENST00000655649.1	LINC01524-217	896	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000669837.1	LINC01524-264	861	No protein	-	lncRNA	-	-
ENST00000655981.2	LINC01524-218	854	No protein	-	lncRNA	-	-
ENST00000765416.1	LINC01524-296	852	No protein	-	lncRNA	-	-
ENST00000662344.1	LINC01524-240	851	No protein	-	lncRNA	-	-
ENST00000662183.2	LINC01524-239	847	No protein	-	lncRNA	-	-
ENST00000765392.1	LINC01524-272	845	No protein	-	lncRNA	-	-
ENST00000765423.1	LINC01524-303	841	No protein	-	lncRNA	-	-
ENST00000663247.2	LINC01524-243	840	No protein	-	lncRNA	-	-
ENST00000765397.1	LINC01524-277	832	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000655588.2	LINC01524-216	827	No protein	-	lncRNA	-	-
ENST00000661039.1	LINC01524-231	815	No protein	-	lncRNA	-	-
ENST00000655073.2	LINC01524-213	814	No protein	-	lncRNA	-	-
ENST00000765389.1	LINC01524-269	810	No protein	-	lncRNA	-	-
ENST00000655345.1	LINC01524-214	802	No protein	-	lncRNA	-	-
ENST00000765410.1	LINC01524-290	795	No protein	-	lncRNA	-	-
ENST00000666722.2	LINC01524-255	790	No protein	-	lncRNA	-	-
ENST00000765403.1	LINC01524-283	784	No protein	-	lncRNA	-	-
ENST00000765409.1	LINC01524-289	782	No protein	-	lncRNA	-	-
ENST00000765418.1	LINC01524-298	778	No protein	-	lncRNA	-	-
ENST00000668857.1	LINC01524-260	771	No protein	-	lncRNA	-	-
ENST00000662569.1	LINC01524-241	770	No protein	-	lncRNA	-	-
ENST00000765390.1	LINC01524-270	769	No protein	-	lncRNA	-	-
ENST00000765428.1	LINC01524-308	752	No protein	-	lncRNA	-	-
ENST00000454600.1	LINC01524-208	745	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000765415.1	LINC01524-295	742	No protein	-	lncRNA	-	-
ENST00000657861.2	LINC01524-225	738	No protein	-	lncRNA	-	-
ENST00000765424.1	LINC01524-304	730	No protein	-	lncRNA	-	-
ENST00000765411.1	LINC01524-291	727	No protein	-	lncRNA	-	-
ENST00000765426.1	LINC01524-306	699	No protein	-	lncRNA	-	-
ENST00000656056.1	LINC01524-220	685	No protein	-	lncRNA	-	-
ENST00000765406.1	LINC01524-286	671	No protein	-	lncRNA	-	-
ENST00000653220.2	LINC01524-209	669	No protein	-	lncRNA	-	-
ENST00000765402.1	LINC01524-282	668	No protein	-	lncRNA	-	-
ENST00000659204.1	LINC01524-228	658	No protein	-	lncRNA	-	-
ENST00000765396.1	LINC01524-276	651	No protein	-	lncRNA	-	-
ENST00000656367.1	LINC01524-223	645	No protein	-	lncRNA	-	-
ENST00000765413.1	LINC01524-293	643	No protein	-	lncRNA	-	-
ENST00000765430.1	LINC01524-310	636	No protein	-	lncRNA	-	-
ENST00000413070.3	LINC01524-201	632	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000765395.1	LINC01524-275	632	No protein	-	lncRNA	-	-
ENST00000665325.1	LINC01524-249	625	No protein	-	lncRNA	-	-
ENST00000765421.1	LINC01524-301	620	No protein	-	lncRNA	-	-
ENST00000658665.1	LINC01524-226	616	No protein	-	lncRNA	-	-
ENST00000765412.1	LINC01524-292	599	No protein	-	lncRNA	-	-
ENST00000765425.1	LINC01524-305	591	No protein	-	lncRNA	-	-
ENST00000667358.2	LINC01524-257	579	No protein	-	lncRNA	-	-
ENST00000765417.1	LINC01524-297	579	No protein	-	lncRNA	-	-
ENST00000765429.1	LINC01524-309	563	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000765434.1	LINC01524-314	553	No protein	-	lncRNA	-	-
ENST00000765393.1	LINC01524-273	551	No protein	-	lncRNA	-	-
ENST00000765438.1	LINC01524-318	540	No protein	-	lncRNA	-	-
ENST00000663698.1	LINC01524-246	527	No protein	-	lncRNA	-	-
ENST00000765432.1	LINC01524-312	494	No protein	-	lncRNA	-	-
ENST00000421642.5	LINC01524-202	486	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000765437.1	LINC01524-317	484	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000765433.1	LINC01524-313	480	No protein	-	lncRNA	-	-
ENST00000765420.1	LINC01524-300	477	No protein	-	lncRNA	-	-
ENST00000765435.1	LINC01524-315	469	No protein	-	lncRNA	-	-
ENST00000669548.1	LINC01524-262	468	No protein	-	lncRNA	-	-
ENST00000765408.1	LINC01524-288	457	No protein	-	lncRNA	-	-
ENST00000765431.1	LINC01524-311	423	No protein	-	lncRNA	-	-
ENST00000765439.1	LINC01524-319	387	No protein	-	lncRNA	-	-
ENST00000422666.1	LINC01524-203	374	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000437987.1	LINC01524-206	182	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 790 bps,

Version

ENST00000666722.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000666722.2 LINC01524-255

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Transcript: ENST00000666722.2 LINC01524-255

Summary

About Us

Get help

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