Transcript: ENST00000666705.1 LINC01607-203

Description

long intergenic non-protein coding RNA 1607 [Source:HGNC Symbol;Acc:HGNC:51660]

Location

Chromosome 8: 79,768,110-79,783,366 forward strand.

About this transcript

This transcript has 3 exons and maps to 71 oligo probes.

Gene

This transcript is a product of gene ENSG00000272138.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000845395.1	LINC01607-205	1217	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000666705.1	LINC01607-203	3529	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000607754.5	LINC01607-202	1199	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000693037.3	LINC01607-204	1124	No protein	-	lncRNA	-	-
ENST00000845408.1	LINC01607-218	770	No protein	-	lncRNA	-	-
ENST00000845402.1	LINC01607-212	758	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000845401.1	LINC01607-211	703	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000845397.1	LINC01607-207	699	No protein	-	lncRNA	-	-
ENST00000845398.1	LINC01607-208	693	No protein	-	lncRNA	-	-
ENST00000845396.1	LINC01607-206	688	No protein	-	lncRNA	-	-
ENST00000845400.1	LINC01607-210	685	No protein	-	lncRNA	-	-
ENST00000845407.1	LINC01607-217	642	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000845403.1	LINC01607-213	623	No protein	-	lncRNA	-	-
ENST00000607172.1	LINC01607-201	621	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000845406.1	LINC01607-216	602	No protein	-	lncRNA	-	-
ENST00000845404.1	LINC01607-214	594	No protein	-	lncRNA	-	-
ENST00000845399.1	LINC01607-209	581	No protein	-	lncRNA	-	-
ENST00000845409.1	LINC01607-219	552	No protein	-	lncRNA	-	-
ENST00000845405.1	LINC01607-215	495	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 3,529 bps,

Version

ENST00000666705.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000666705.1 LINC01607-203

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Transcript: ENST00000666705.1 LINC01607-203

Summary

About Us

Get help

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