Transcript: ENST00000666545.1 LINC01353-205

Description

long intergenic non-protein coding RNA 1353 [Source:HGNC Symbol;Acc:HGNC:50580]

Location

Chromosome 1: 203,273,221-203,288,712 forward strand.

About this transcript

This transcript has 4 exons, is associated with 6110 variant alleles and maps to 139 oligo probes.

Gene

This transcript is a product of gene ENSG00000231507.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000666545.1	LINC01353-205	791	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000701093.2	LINC01353-208	1191	No protein	-	lncRNA	-	-
ENST00000779132.1	LINC01353-226	1117	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000412772.3	LINC01353-201	1113	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000779138.1	LINC01353-232	1103	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000688999.2	LINC01353-207	1102	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000779140.1	LINC01353-234	1076	No protein	-	lncRNA	-	-
ENST00000662282.2	LINC01353-204	1065	No protein	-	lncRNA	-	-
ENST00000779146.1	LINC01353-240	1022	No protein	-	lncRNA	-	-
ENST00000779120.1	LINC01353-214	993	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000779151.1	LINC01353-245	976	No protein	-	lncRNA	-	-
ENST00000779117.1	LINC01353-211	972	No protein	-	lncRNA	-	-
ENST00000657300.2	LINC01353-203	956	No protein	-	lncRNA	-	-
ENST00000779128.1	LINC01353-222	956	No protein	-	lncRNA	-	-
ENST00000779131.1	LINC01353-225	924	No protein	-	lncRNA	-	-
ENST00000779143.1	LINC01353-237	913	No protein	-	lncRNA	-	-
ENST00000779135.1	LINC01353-229	901	No protein	-	lncRNA	-	-
ENST00000779136.1	LINC01353-230	872	No protein	-	lncRNA	-	-
ENST00000779133.1	LINC01353-227	856	No protein	-	lncRNA	-	-
ENST00000779152.1	LINC01353-246	837	No protein	-	lncRNA	-	-
ENST00000779137.1	LINC01353-231	795	No protein	-	lncRNA	-	-
ENST00000779124.1	LINC01353-218	782	No protein	-	lncRNA	-	-
ENST00000779125.1	LINC01353-219	781	No protein	-	lncRNA	-	-
ENST00000779126.1	LINC01353-220	771	No protein	-	lncRNA	-	-
ENST00000779157.1	LINC01353-251	771	No protein	-	lncRNA	-	-
ENST00000702761.2	LINC01353-209	767	No protein	-	lncRNA	-	-
ENST00000433008.3	LINC01353-202	764	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000779141.1	LINC01353-235	754	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000779147.1	LINC01353-241	752	No protein	-	lncRNA	-	-
ENST00000688046.2	LINC01353-206	728	No protein	-	lncRNA	-	-
ENST00000779127.1	LINC01353-221	713	No protein	-	lncRNA	-	-
ENST00000779149.1	LINC01353-243	681	No protein	-	lncRNA	-	-
ENST00000779130.1	LINC01353-224	679	No protein	-	lncRNA	-	-
ENST00000779158.1	LINC01353-252	677	No protein	-	lncRNA	-	-
ENST00000779156.1	LINC01353-250	676	No protein	-	lncRNA	-	-
ENST00000779119.1	LINC01353-213	656	No protein	-	lncRNA	-	-
ENST00000779142.1	LINC01353-236	642	No protein	-	lncRNA	-	-
ENST00000779160.1	LINC01353-254	621	No protein	-	lncRNA	-	-
ENST00000779122.1	LINC01353-216	616	No protein	-	lncRNA	-	-
ENST00000779148.1	LINC01353-242	615	No protein	-	lncRNA	-	-
ENST00000779134.1	LINC01353-228	608	No protein	-	lncRNA	-	-
ENST00000779118.1	LINC01353-212	605	No protein	-	lncRNA	-	-
ENST00000779150.1	LINC01353-244	605	No protein	-	lncRNA	-	-
ENST00000779155.1	LINC01353-249	598	No protein	-	lncRNA	-	-
ENST00000779161.1	LINC01353-255	591	No protein	-	lncRNA	-	-
ENST00000779153.1	LINC01353-247	568	No protein	-	lncRNA	-	-
ENST00000779163.1	LINC01353-257	567	No protein	-	lncRNA	-	-
ENST00000779145.1	LINC01353-239	566	No protein	-	lncRNA	-	-
ENST00000779116.1	LINC01353-210	558	No protein	-	lncRNA	-	-
ENST00000779154.1	LINC01353-248	553	No protein	-	lncRNA	-	-
ENST00000779129.1	LINC01353-223	523	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000779162.1	LINC01353-256	511	No protein	-	lncRNA	-	-
ENST00000779159.1	LINC01353-253	453	No protein	-	lncRNA	-	-
ENST00000779121.1	LINC01353-215	438	No protein	-	lncRNA	-	-
ENST00000779139.1	LINC01353-233	425	No protein	-	lncRNA	-	-
ENST00000779144.1	LINC01353-238	397	No protein	-	lncRNA	-	-
ENST00000779123.1	LINC01353-217	388	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 791 bps,

Version

ENST00000666545.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.

Transcript: ENST00000666545.1 LINC01353-205

Summary

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Transcript: ENST00000666545.1 LINC01353-205

Summary

About Us

Get help

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