Transcript: ENST00000666541.1 SPRY4-AS1-226

Description

SPRY4 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:53465]

Gene Synonyms

AC005592.2, THCAT68

Location

Chromosome 5: 142,745,556-142,759,738 forward strand.

About this transcript

This transcript has 4 exons and maps to 371 oligo probes.

Gene

This transcript is a product of gene ENSG00000231185.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000655828.2	SPRY4-AS1-212	3590	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000666438.2	SPRY4-AS1-225	2926	No protein	-	lncRNA	-	-
ENST00000667174.1	SPRY4-AS1-227	2752	No protein	-	lncRNA	-	-
ENST00000665462.2	SPRY4-AS1-223	2425	No protein	-	lncRNA	-	-
ENST00000850659.1	SPRY4-AS1-297	2410	No protein	-	lncRNA	-	-
ENST00000658433.1	SPRY4-AS1-214	2360	No protein	-	lncRNA	-	-
ENST00000658361.1	SPRY4-AS1-213	2280	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000432677.2	SPRY4-AS1-203	2276	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000668371.1	SPRY4-AS1-230	1876	No protein	-	lncRNA	-	-
ENST00000659517.1	SPRY4-AS1-216	1847	No protein	-	lncRNA	-	-
ENST00000660053.2	SPRY4-AS1-219	1798	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000724963.1	SPRY4-AS1-241	1742	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000666274.1	SPRY4-AS1-224	1601	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000652722.1	SPRY4-AS1-208	1351	No protein	-	lncRNA	-	-
ENST00000700840.1	SPRY4-AS1-233	1344	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000659959.1	SPRY4-AS1-218	1326	No protein	-	lncRNA	-	-
ENST00000724982.1	SPRY4-AS1-260	1319	No protein	-	lncRNA	-	-
ENST00000669649.1	SPRY4-AS1-231	1312	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000715765.1	SPRY4-AS1-235	1304	No protein	-	lncRNA	-	-
ENST00000724980.1	SPRY4-AS1-258	1302	No protein	-	lncRNA	-	-
ENST00000668207.1	SPRY4-AS1-229	1293	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000724970.1	SPRY4-AS1-248	1220	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000660321.1	SPRY4-AS1-220	1206	No protein	-	lncRNA	-	-
ENST00000652991.1	SPRY4-AS1-209	1200	No protein	-	lncRNA	-	-
ENST00000658459.1	SPRY4-AS1-215	1182	No protein	-	lncRNA	-	-
ENST00000725014.1	SPRY4-AS1-292	1148	No protein	-	lncRNA	-	-
ENST00000724972.1	SPRY4-AS1-250	1113	No protein	-	lncRNA	-	-
ENST00000725004.1	SPRY4-AS1-282	1102	No protein	-	lncRNA	-	-
ENST00000725003.1	SPRY4-AS1-281	1087	No protein	-	lncRNA	-	-
ENST00000654613.1	SPRY4-AS1-210	1082	No protein	-	lncRNA	-	-
ENST00000667247.1	SPRY4-AS1-228	1054	No protein	-	lncRNA	-	-
ENST00000666541.1	SPRY4-AS1-226	1017	No protein	-	lncRNA	-	-
ENST00000725006.1	SPRY4-AS1-284	1017	No protein	-	lncRNA	-	-
ENST00000724964.1	SPRY4-AS1-242	1012	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000724976.1	SPRY4-AS1-254	1002	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000724979.1	SPRY4-AS1-257	993	No protein	-	lncRNA	-	-
ENST00000725007.1	SPRY4-AS1-285	989	No protein	-	lncRNA	-	-
ENST00000662893.1	SPRY4-AS1-221	979	No protein	-	lncRNA	-	-
ENST00000724958.1	SPRY4-AS1-236	979	No protein	-	lncRNA	-	-
ENST00000510311.6	SPRY4-AS1-205	977	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000654654.1	SPRY4-AS1-211	972	No protein	-	lncRNA	-	-
ENST00000515288.4	SPRY4-AS1-207	926	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000724977.1	SPRY4-AS1-255	906	No protein	-	lncRNA	-	-
ENST00000724981.1	SPRY4-AS1-259	887	No protein	-	lncRNA	-	-
ENST00000724978.1	SPRY4-AS1-256	872	No protein	-	lncRNA	-	-
ENST00000664609.1	SPRY4-AS1-222	869	No protein	-	lncRNA	-	-
ENST00000724987.1	SPRY4-AS1-265	829	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000725002.1	SPRY4-AS1-280	819	No protein	-	lncRNA	-	-
ENST00000725008.1	SPRY4-AS1-286	804	No protein	-	lncRNA	-	-
ENST00000414314.2	SPRY4-AS1-201	794	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000724973.1	SPRY4-AS1-251	785	No protein	-	lncRNA	-	-
ENST00000724966.1	SPRY4-AS1-244	774	No protein	-	lncRNA	-	-
ENST00000724983.1	SPRY4-AS1-261	766	No protein	-	lncRNA	-	-
ENST00000670541.1	SPRY4-AS1-232	760	No protein	-	lncRNA	-	-
ENST00000659596.1	SPRY4-AS1-217	759	No protein	-	lncRNA	-	-
ENST00000725016.1	SPRY4-AS1-294	748	No protein	-	lncRNA	-	-
ENST00000725009.1	SPRY4-AS1-287	736	No protein	-	lncRNA	-	-
ENST00000725012.1	SPRY4-AS1-290	735	No protein	-	lncRNA	-	-
ENST00000724965.1	SPRY4-AS1-243	732	No protein	-	lncRNA	-	-
ENST00000724996.1	SPRY4-AS1-274	719	No protein	-	lncRNA	-	-
ENST00000795850.1	SPRY4-AS1-296	693	No protein	-	lncRNA	-	-
ENST00000724968.1	SPRY4-AS1-246	684	No protein	-	lncRNA	-	-
ENST00000724969.1	SPRY4-AS1-247	683	No protein	-	lncRNA	-	-
ENST00000724960.1	SPRY4-AS1-238	679	No protein	-	lncRNA	-	-
ENST00000724962.1	SPRY4-AS1-240	671	No protein	-	lncRNA	-	-
ENST00000724974.1	SPRY4-AS1-252	669	No protein	-	lncRNA	-	-
ENST00000724959.1	SPRY4-AS1-237	664	No protein	-	lncRNA	-	-
ENST00000724998.1	SPRY4-AS1-276	656	No protein	-	lncRNA	-	-
ENST00000725010.1	SPRY4-AS1-288	653	No protein	-	lncRNA	-	-
ENST00000724967.1	SPRY4-AS1-245	643	No protein	-	lncRNA	-	-
ENST00000702107.1	SPRY4-AS1-234	639	No protein	-	lncRNA	-	-
ENST00000724997.1	SPRY4-AS1-275	633	No protein	-	lncRNA	-	-
ENST00000724992.1	SPRY4-AS1-270	593	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000725015.1	SPRY4-AS1-293	593	No protein	-	lncRNA	-	-
ENST00000725013.1	SPRY4-AS1-291	588	No protein	-	lncRNA	-	-
ENST00000724995.1	SPRY4-AS1-273	584	No protein	-	lncRNA	-	-
ENST00000443800.5	SPRY4-AS1-204	566	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000724971.1	SPRY4-AS1-249	559	No protein	-	lncRNA	-	-
ENST00000725011.1	SPRY4-AS1-289	558	No protein	-	lncRNA	-	-
ENST00000724994.1	SPRY4-AS1-272	544	No protein	-	lncRNA	-	-
ENST00000724984.1	SPRY4-AS1-262	526	No protein	-	lncRNA	-	-
ENST00000724961.1	SPRY4-AS1-239	525	No protein	-	lncRNA	-	-
ENST00000724999.1	SPRY4-AS1-277	524	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000724991.1	SPRY4-AS1-269	521	No protein	-	lncRNA	-	-
ENST00000724988.1	SPRY4-AS1-266	485	No protein	-	lncRNA	-	-
ENST00000724989.1	SPRY4-AS1-267	473	No protein	-	lncRNA	-	-
ENST00000724986.1	SPRY4-AS1-264	422	No protein	-	lncRNA	-	-
ENST00000724975.1	SPRY4-AS1-253	399	No protein	-	lncRNA	-	-
ENST00000724985.1	SPRY4-AS1-263	387	No protein	-	lncRNA	-	-
ENST00000725000.1	SPRY4-AS1-278	372	No protein	-	lncRNA	-	-
ENST00000724993.1	SPRY4-AS1-271	369	No protein	-	lncRNA	-	-
ENST00000425963.1	SPRY4-AS1-202	362	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000724990.1	SPRY4-AS1-268	360	No protein	-	lncRNA	-	-
ENST00000725005.1	SPRY4-AS1-283	322	No protein	-	lncRNA	-	-
ENST00000725001.1	SPRY4-AS1-279	308	No protein	-	lncRNA	-	-
ENST00000725017.1	SPRY4-AS1-295	207	No protein	-	lncRNA	-	-
ENST00000514303.1	SPRY4-AS1-206	152	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,017 bps,

Version

ENST00000666541.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000666541.1 SPRY4-AS1-226

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Transcript: ENST00000666541.1 SPRY4-AS1-226

Summary

About Us

Get help

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