Transcript: ENST00000666522.2 LINC01322-229

Description

long intergenic non-protein coding RNA 1322 [Source:HGNC Symbol;Acc:HGNC:50528]

Gene Synonyms

RUS

Location

Chromosome 3: 165,206,964-165,462,553 forward strand.

About this transcript

This transcript has 3 exons and maps to 141 oligo probes.

Gene

This transcript is a product of gene ENSG00000244128.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000651449.1	LINC01322-205	1635	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000670403.1	LINC01322-234	3279	No protein	-	lncRNA	-	-
ENST00000665369.1	LINC01322-227	3135	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000660780.2	LINC01322-219	2854	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000654261.3	LINC01322-212	2689	No protein	-	lncRNA	-	-
ENST00000670998.1	LINC01322-237	2458	No protein	-	lncRNA	-	-
ENST00000666522.2	LINC01322-229	2411	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000653747.2	LINC01322-207	2143	No protein	-	lncRNA	-	-
ENST00000771450.1	LINC01322-282	2127	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000771446.1	LINC01322-278	2106	No protein	-	lncRNA	-	-
ENST00000771448.1	LINC01322-280	2009	No protein	-	lncRNA	-	-
ENST00000771451.1	LINC01322-283	2003	No protein	-	lncRNA	-	-
ENST00000771447.1	LINC01322-279	1960	No protein	-	lncRNA	-	-
ENST00000670338.2	LINC01322-233	1947	No protein	-	lncRNA	-	-
ENST00000661151.2	LINC01322-220	1854	No protein	-	lncRNA	-	-
ENST00000665240.3	LINC01322-226	1836	No protein	-	lncRNA	-	-
ENST00000692780.1	LINC01322-245	1805	No protein	-	lncRNA	-	-
ENST00000670918.2	LINC01322-236	1802	No protein	-	lncRNA	-	-
ENST00000771459.1	LINC01322-291	1790	No protein	-	lncRNA	-	-
ENST00000661555.2	LINC01322-222	1766	No protein	-	lncRNA	-	-
ENST00000771449.1	LINC01322-281	1753	No protein	-	lncRNA	-	-
ENST00000652830.1	LINC01322-206	1713	No protein	-	lncRNA	-	-
ENST00000664927.2	LINC01322-225	1707	No protein	-	lncRNA	-	-
ENST00000771452.1	LINC01322-284	1581	No protein	-	lncRNA	-	-
ENST00000700910.2	LINC01322-246	1576	No protein	-	lncRNA	-	-
ENST00000653864.2	LINC01322-209	1467	No protein	-	lncRNA	-	-
ENST00000692442.1	LINC01322-244	1406	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000663897.1	LINC01322-223	1388	No protein	-	lncRNA	-	-
ENST00000771429.1	LINC01322-261	1280	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000702310.1	LINC01322-249	1234	No protein	-	lncRNA	-	-
ENST00000771431.1	LINC01322-263	1232	No protein	-	lncRNA	-	-
ENST00000670463.1	LINC01322-235	1228	No protein	-	lncRNA	-	-
ENST00000670150.1	LINC01322-232	1215	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000655586.1	LINC01322-215	1197	No protein	-	lncRNA	-	-
ENST00000654990.1	LINC01322-214	1153	No protein	-	lncRNA	-	-
ENST00000654580.1	LINC01322-213	1150	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000771424.1	LINC01322-256	1146	No protein	-	lncRNA	-	-
ENST00000771433.1	LINC01322-265	1107	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000771420.1	LINC01322-252	1092	No protein	-	lncRNA	-	-
ENST00000496693.1	LINC01322-203	1075	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000653773.1	LINC01322-208	1060	No protein	-	lncRNA	-	-
ENST00000701546.1	LINC01322-247	1042	No protein	-	lncRNA	-	-
ENST00000657326.1	LINC01322-217	1035	No protein	-	lncRNA	-	-
ENST00000659430.1	LINC01322-218	1020	No protein	-	lncRNA	-	-
ENST00000685671.1	LINC01322-238	1020	No protein	-	lncRNA	-	-
ENST00000771426.1	LINC01322-258	1018	No protein	-	lncRNA	-	-
ENST00000656293.1	LINC01322-216	1015	No protein	-	lncRNA	-	-
ENST00000771453.1	LINC01322-285	1011	No protein	-	lncRNA	-	-
ENST00000771430.1	LINC01322-262	998	No protein	-	lncRNA	-	-
ENST00000771422.1	LINC01322-254	993	No protein	-	lncRNA	-	-
ENST00000771427.1	LINC01322-259	982	No protein	-	lncRNA	-	-
ENST00000666398.1	LINC01322-228	970	No protein	-	lncRNA	-	-
ENST00000686578.1	LINC01322-239	962	No protein	-	lncRNA	-	-
ENST00000771437.1	LINC01322-269	948	No protein	-	lncRNA	-	-
ENST00000771421.1	LINC01322-253	938	No protein	-	lncRNA	-	-
ENST00000771423.1	LINC01322-255	937	No protein	-	lncRNA	-	-
ENST00000688911.2	LINC01322-241	935	No protein	-	lncRNA	-	-
ENST00000653967.1	LINC01322-210	903	No protein	-	lncRNA	-	-
ENST00000688054.2	LINC01322-240	899	No protein	-	lncRNA	-	-
ENST00000771435.1	LINC01322-267	886	No protein	-	lncRNA	-	-
ENST00000771436.1	LINC01322-268	880	No protein	-	lncRNA	-	-
ENST00000771425.1	LINC01322-257	879	No protein	-	lncRNA	-	-
ENST00000771440.1	LINC01322-272	865	No protein	-	lncRNA	-	-
ENST00000689289.1	LINC01322-242	851	No protein	-	lncRNA	-	-
ENST00000771462.1	LINC01322-294	845	No protein	-	lncRNA	-	-
ENST00000771441.1	LINC01322-273	840	No protein	-	lncRNA	-	-
ENST00000771428.1	LINC01322-260	839	No protein	-	lncRNA	-	-
ENST00000771454.1	LINC01322-286	833	No protein	-	lncRNA	-	-
ENST00000689692.3	LINC01322-243	821	No protein	-	lncRNA	-	-
ENST00000771432.1	LINC01322-264	821	No protein	-	lncRNA	-	-
ENST00000771455.1	LINC01322-287	804	No protein	-	lncRNA	-	-
ENST00000669761.1	LINC01322-231	779	No protein	-	lncRNA	-	-
ENST00000771439.1	LINC01322-271	772	No protein	-	lncRNA	-	-
ENST00000771434.1	LINC01322-266	732	No protein	-	lncRNA	-	-
ENST00000661419.1	LINC01322-221	713	No protein	-	lncRNA	-	-
ENST00000668542.1	LINC01322-230	707	No protein	-	lncRNA	-	-
ENST00000771442.1	LINC01322-274	702	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000771444.1	LINC01322-276	691	No protein	-	lncRNA	-	-
ENST00000771418.1	LINC01322-250	685	No protein	-	lncRNA	-	-
ENST00000771419.1	LINC01322-251	682	No protein	-	lncRNA	-	-
ENST00000494915.2	LINC01322-202	681	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000654069.1	LINC01322-211	680	No protein	-	lncRNA	-	-
ENST00000771438.1	LINC01322-270	663	No protein	-	lncRNA	-	-
ENST00000498616.7	LINC01322-204	661	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000771443.1	LINC01322-275	641	No protein	-	lncRNA	-	-
ENST00000771461.1	LINC01322-293	631	No protein	-	lncRNA	-	-
ENST00000771460.1	LINC01322-292	613	No protein	-	lncRNA	-	-
ENST00000702055.2	LINC01322-248	607	No protein	-	lncRNA	-	-
ENST00000771457.1	LINC01322-289	580	No protein	-	lncRNA	-	-
ENST00000771445.1	LINC01322-277	578	No protein	-	lncRNA	-	-
ENST00000470138.5	LINC01322-201	577	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000771464.1	LINC01322-296	559	No protein	-	lncRNA	-	-
ENST00000664292.1	LINC01322-224	531	No protein	-	lncRNA	-	-
ENST00000771456.1	LINC01322-288	517	No protein	-	lncRNA	-	-
ENST00000771458.1	LINC01322-290	451	No protein	-	lncRNA	-	-
ENST00000771463.1	LINC01322-295	361	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 2,411 bps,

Version

ENST00000666522.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000666522.2 LINC01322-229

Summary

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Transcript: ENST00000666522.2 LINC01322-229

Summary

About Us

Get help

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