Transcript: ENST00000665697.2 LINC02532-236

Description

long intergenic non-protein coding RNA 2532 [Source:HGNC Symbol;Acc:HGNC:53549]

Location

Chromosome 6: 106,717,452-106,787,531 reverse strand.

About this transcript

This transcript has 6 exons and maps to 386 oligo probes.

Gene

This transcript is a product of gene ENSG00000235142.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000418134.2	LINC02532-202	1243	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000607758.1	LINC02532-212	449	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000669890.1	LINC02532-242	1125	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000671512.4	LINC02532-248	3005	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000602934.3	LINC02532-209	2853	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000669428.1	LINC02532-241	2833	No protein	-	lncRNA	-	-
ENST00000602621.5	LINC02532-208	2232	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000657421.1	LINC02532-223	2193	No protein	-	lncRNA	-	-
ENST00000654718.1	LINC02532-218	2135	No protein	-	lncRNA	-	-
ENST00000844274.1	LINC02532-295	1880	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000650222.1	LINC02532-213	1789	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000669268.1	LINC02532-240	1720	No protein	-	lncRNA	-	-
ENST00000700812.1	LINC02532-256	1685	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000662681.2	LINC02532-231	1675	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000844277.1	LINC02532-298	1669	No protein	-	lncRNA	-	-
ENST00000670755.2	LINC02532-244	1662	No protein	-	lncRNA	-	-
ENST00000844281.1	LINC02532-302	1625	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000653923.1	LINC02532-216	1614	No protein	-	lncRNA	-	-
ENST00000664432.4	LINC02532-235	1606	No protein	-	lncRNA	-	-
ENST00000655499.3	LINC02532-221	1603	No protein	-	lncRNA	-	-
ENST00000659907.1	LINC02532-227	1582	No protein	-	lncRNA	-	-
ENST00000844279.1	LINC02532-300	1582	No protein	-	lncRNA	-	-
ENST00000667554.3	LINC02532-238	1571	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000660557.3	LINC02532-229	1569	No protein	-	lncRNA	-	-
ENST00000844306.1	LINC02532-327	1566	No protein	-	lncRNA	-	-
ENST00000844334.1	LINC02532-355	1547	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000670549.2	LINC02532-243	1545	No protein	-	lncRNA	-	-
ENST00000671288.1	LINC02532-247	1539	No protein	-	lncRNA	-	-
ENST00000701426.2	LINC02532-262	1527	No protein	-	lncRNA	-	-
ENST00000844317.1	LINC02532-338	1523	No protein	-	lncRNA	-	-
ENST00000655135.1	LINC02532-220	1511	No protein	-	lncRNA	-	-
ENST00000671150.1	LINC02532-245	1504	No protein	-	lncRNA	-	-
ENST00000844288.1	LINC02532-309	1494	No protein	-	lncRNA	-	-
ENST00000687068.1	LINC02532-249	1483	No protein	-	lncRNA	-	-
ENST00000436659.6	LINC02532-207	1475	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000668203.1	LINC02532-239	1464	No protein	-	lncRNA	-	-
ENST00000844262.1	LINC02532-283	1464	No protein	-	lncRNA	-	-
ENST00000702038.1	LINC02532-270	1454	No protein	-	lncRNA	-	-
ENST00000665697.2	LINC02532-236	1441	No protein	-	lncRNA	-	-
ENST00000702196.2	LINC02532-272	1435	No protein	-	lncRNA	-	-
ENST00000655094.1	LINC02532-219	1433	No protein	-	lncRNA	-	-
ENST00000653256.2	LINC02532-215	1425	No protein	-	lncRNA	-	-
ENST00000844276.1	LINC02532-297	1395	No protein	-	lncRNA	-	-
ENST00000658326.2	LINC02532-224	1383	No protein	-	lncRNA	-	-
ENST00000844271.1	LINC02532-292	1382	No protein	-	lncRNA	-	-
ENST00000701118.2	LINC02532-260	1380	No protein	-	lncRNA	-	-
ENST00000844346.1	LINC02532-367	1378	No protein	-	lncRNA	-	-
ENST00000671265.2	LINC02532-246	1369	No protein	-	lncRNA	-	-
ENST00000844270.1	LINC02532-291	1364	No protein	-	lncRNA	-	-
ENST00000688514.2	LINC02532-251	1358	No protein	-	lncRNA	-	-
ENST00000433965.9	LINC02532-206	1356	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000692919.2	LINC02532-254	1356	No protein	-	lncRNA	-	-
ENST00000702353.2	LINC02532-274	1352	No protein	-	lncRNA	-	-
ENST00000844309.1	LINC02532-330	1352	No protein	-	lncRNA	-	-
ENST00000659547.1	LINC02532-225	1349	No protein	-	lncRNA	-	-
ENST00000700948.2	LINC02532-259	1342	No protein	-	lncRNA	-	-
ENST00000844273.1	LINC02532-294	1340	No protein	-	lncRNA	-	-
ENST00000844333.1	LINC02532-354	1339	No protein	-	lncRNA	-	-
ENST00000844310.1	LINC02532-331	1337	No protein	-	lncRNA	-	-
ENST00000702327.2	LINC02532-273	1314	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000701739.2	LINC02532-266	1310	No protein	-	lncRNA	-	-
ENST00000844339.1	LINC02532-360	1284	No protein	-	lncRNA	-	-
ENST00000702365.2	LINC02532-276	1280	No protein	-	lncRNA	-	-
ENST00000664142.1	LINC02532-234	1275	No protein	-	lncRNA	-	-
ENST00000844285.1	LINC02532-306	1275	No protein	-	lncRNA	-	-
ENST00000844261.1	LINC02532-282	1269	No protein	-	lncRNA	-	-
ENST00000656351.2	LINC02532-222	1237	No protein	-	lncRNA	-	-
ENST00000687581.2	LINC02532-250	1233	No protein	-	lncRNA	-	-
ENST00000844272.1	LINC02532-293	1225	No protein	-	lncRNA	-	-
ENST00000844340.1	LINC02532-361	1216	No protein	-	lncRNA	-	-
ENST00000661417.1	LINC02532-230	1208	No protein	-	lncRNA	-	-
ENST00000844338.1	LINC02532-359	1180	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000415714.5	LINC02532-201	1171	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000665966.3	LINC02532-237	1157	No protein	-	lncRNA	-	-
ENST00000844337.1	LINC02532-358	1151	No protein	-	lncRNA	-	-
ENST00000702011.2	LINC02532-269	1141	No protein	-	lncRNA	-	-
ENST00000701462.1	LINC02532-263	1137	No protein	-	lncRNA	-	-
ENST00000663790.1	LINC02532-233	1126	No protein	-	lncRNA	-	-
ENST00000844335.1	LINC02532-356	1112	No protein	-	lncRNA	-	-
ENST00000660185.1	LINC02532-228	1089	No protein	-	lncRNA	-	-
ENST00000844264.1	LINC02532-285	1073	No protein	-	lncRNA	-	-
ENST00000844294.1	LINC02532-315	1052	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000844257.1	LINC02532-278	1045	No protein	-	lncRNA	-	-
ENST00000844269.1	LINC02532-290	1031	No protein	-	lncRNA	-	-
ENST00000659564.1	LINC02532-226	1017	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000701680.1	LINC02532-265	1005	No protein	-	lncRNA	-	-
ENST00000844258.1	LINC02532-279	996	No protein	-	lncRNA	-	-
ENST00000654576.1	LINC02532-217	995	No protein	-	lncRNA	-	-
ENST00000428750.6	LINC02532-204	961	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000844291.1	LINC02532-312	933	No protein	-	lncRNA	-	-
ENST00000844263.1	LINC02532-284	917	No protein	-	lncRNA	-	-
ENST00000844293.1	LINC02532-314	909	No protein	-	lncRNA	-	-
ENST00000702077.1	LINC02532-271	881	No protein	-	lncRNA	-	-
ENST00000690981.2	LINC02532-253	874	No protein	-	lncRNA	-	-
ENST00000844301.1	LINC02532-322	873	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000701947.1	LINC02532-268	866	No protein	-	lncRNA	-	-
ENST00000663403.1	LINC02532-232	849	No protein	-	lncRNA	-	-
ENST00000844259.1	LINC02532-280	847	No protein	-	lncRNA	-	-
ENST00000844265.1	LINC02532-286	832	No protein	-	lncRNA	-	-
ENST00000844313.1	LINC02532-334	827	No protein	-	lncRNA	-	-
ENST00000427903.6	LINC02532-203	800	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000690411.3	LINC02532-252	789	No protein	-	lncRNA	-	-
ENST00000844283.1	LINC02532-304	788	No protein	-	lncRNA	-	-
ENST00000844341.1	LINC02532-362	777	No protein	-	lncRNA	-	-
ENST00000844315.1	LINC02532-336	772	No protein	-	lncRNA	-	-
ENST00000844308.1	LINC02532-329	749	No protein	-	lncRNA	-	-
ENST00000844292.1	LINC02532-313	739	No protein	-	lncRNA	-	-
ENST00000653189.1	LINC02532-214	738	No protein	-	lncRNA	-	-
ENST00000844347.1	LINC02532-368	736	No protein	-	lncRNA	-	-
ENST00000844300.1	LINC02532-321	734	No protein	-	lncRNA	-	-
ENST00000844298.1	LINC02532-319	732	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000844266.1	LINC02532-287	722	No protein	-	lncRNA	-	-
ENST00000844296.1	LINC02532-317	714	No protein	-	lncRNA	-	-
ENST00000701310.2	LINC02532-261	709	No protein	-	lncRNA	-	-
ENST00000844319.1	LINC02532-340	698	No protein	-	lncRNA	-	-
ENST00000844290.1	LINC02532-311	685	No protein	-	lncRNA	-	-
ENST00000844302.1	LINC02532-323	677	No protein	-	lncRNA	-	-
ENST00000702360.2	LINC02532-275	663	No protein	-	lncRNA	-	-
ENST00000844318.1	LINC02532-339	661	No protein	-	lncRNA	-	-
ENST00000844280.1	LINC02532-301	660	No protein	-	lncRNA	-	-
ENST00000844325.1	LINC02532-346	648	No protein	-	lncRNA	-	-
ENST00000844331.1	LINC02532-352	645	No protein	-	lncRNA	-	-
ENST00000844328.1	LINC02532-349	642	No protein	-	lncRNA	-	-
ENST00000844330.1	LINC02532-351	634	No protein	-	lncRNA	-	-
ENST00000844256.1	LINC02532-277	633	No protein	-	lncRNA	-	-
ENST00000430094.1	LINC02532-205	628	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000844326.1	LINC02532-347	619	No protein	-	lncRNA	-	-
ENST00000693740.2	LINC02532-255	617	No protein	-	lncRNA	-	-
ENST00000844275.1	LINC02532-296	614	No protein	-	lncRNA	-	-
ENST00000844320.1	LINC02532-341	592	No protein	-	lncRNA	-	-
ENST00000606430.1	LINC02532-210	584	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000701885.2	LINC02532-267	581	No protein	-	lncRNA	-	-
ENST00000844311.1	LINC02532-332	579	No protein	-	lncRNA	-	-
ENST00000844329.1	LINC02532-350	579	No protein	-	lncRNA	-	-
ENST00000607090.1	LINC02532-211	573	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000844284.1	LINC02532-305	570	No protein	-	lncRNA	-	-
ENST00000844305.1	LINC02532-326	567	No protein	-	lncRNA	-	-
ENST00000844323.1	LINC02532-344	561	No protein	-	lncRNA	-	-
ENST00000844295.1	LINC02532-316	558	No protein	-	lncRNA	-	-
ENST00000844314.1	LINC02532-335	557	No protein	-	lncRNA	-	-
ENST00000844304.1	LINC02532-325	548	No protein	-	lncRNA	-	-
ENST00000844307.1	LINC02532-328	544	No protein	-	lncRNA	-	-
ENST00000844332.1	LINC02532-353	544	No protein	-	lncRNA	-	-
ENST00000700931.2	LINC02532-258	519	No protein	-	lncRNA	-	-
ENST00000844299.1	LINC02532-320	510	No protein	-	lncRNA	-	-
ENST00000844344.1	LINC02532-365	507	No protein	-	lncRNA	-	-
ENST00000844297.1	LINC02532-318	500	No protein	-	lncRNA	-	-
ENST00000844336.1	LINC02532-357	500	No protein	-	lncRNA	-	-
ENST00000701592.1	LINC02532-264	491	No protein	-	lncRNA	-	-
ENST00000700821.2	LINC02532-257	484	No protein	-	lncRNA	-	-
ENST00000844286.1	LINC02532-307	469	No protein	-	lncRNA	-	-
ENST00000844321.1	LINC02532-342	467	No protein	-	lncRNA	-	-
ENST00000844267.1	LINC02532-288	462	No protein	-	lncRNA	-	-
ENST00000844316.1	LINC02532-337	460	No protein	-	lncRNA	-	-
ENST00000844303.1	LINC02532-324	454	No protein	-	lncRNA	-	-
ENST00000844287.1	LINC02532-308	436	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000844345.1	LINC02532-366	432	No protein	-	lncRNA	-	-
ENST00000844268.1	LINC02532-289	421	No protein	-	lncRNA	-	-
ENST00000844342.1	LINC02532-363	411	No protein	-	lncRNA	-	-
ENST00000844278.1	LINC02532-299	406	No protein	-	lncRNA	-	-
ENST00000844312.1	LINC02532-333	389	No protein	-	lncRNA	-	-
ENST00000844322.1	LINC02532-343	369	No protein	-	lncRNA	-	-
ENST00000844282.1	LINC02532-303	363	No protein	-	lncRNA	-	-
ENST00000844327.1	LINC02532-348	357	No protein	-	lncRNA	-	-
ENST00000844260.1	LINC02532-281	352	No protein	-	lncRNA	-	-
ENST00000844348.1	LINC02532-369	337	No protein	-	lncRNA	-	-
ENST00000844289.1	LINC02532-310	323	No protein	-	lncRNA	-	-
ENST00000844343.1	LINC02532-364	282	No protein	-	lncRNA	-	-
ENST00000844324.1	LINC02532-345	274	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 1,441 bps,

Version

ENST00000665697.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000665697.2 LINC02532-236

Summary

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Transcript: ENST00000665697.2 LINC02532-236

Summary

About Us

Get help

Our sister sites

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