Transcript: ENST00000665248.1 LINC02616-214

Description

long intergenic non-protein coding RNA 2616 [Source:HGNC Symbol;Acc:HGNC:54078]

Location

Chromosome 4: 37,001,772-37,019,968 forward strand.

About this transcript

This transcript has 2 exons and maps to 171 oligo probes.

Gene

This transcript is a product of gene ENSG00000261761.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000624352.1	LINC02616-204	702	No protein	-	TEC	-	TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENST00000720070.1	LINC02616-218	1272	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000562049.2	LINC02616-203	2524	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000665248.1	LINC02616-214	1775	No protein	-	lncRNA	-	-
ENST00000652451.1	LINC02616-206	1764	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000660466.1	LINC02616-210	1661	No protein	-	lncRNA	-	-
ENST00000662885.1	LINC02616-213	1582	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000667203.2	LINC02616-216	1542	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000650887.2	LINC02616-205	1504	No protein	-	lncRNA	-	-
ENST00000720071.1	LINC02616-219	1287	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000671043.1	LINC02616-217	1217	No protein	-	lncRNA	-	-
ENST00000661239.1	LINC02616-211	1203	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000653492.2	LINC02616-207	1176	No protein	-	lncRNA	-	-
ENST00000662283.2	LINC02616-212	1109	No protein	-	lncRNA	-	-
ENST00000720077.1	LINC02616-225	1033	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000655789.1	LINC02616-209	1032	No protein	-	lncRNA	-	-
ENST00000665773.2	LINC02616-215	1011	No protein	-	lncRNA	-	-
ENST00000501725.4	LINC02616-201	895	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000720309.1	LINC02616-234	860	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000720307.1	LINC02616-232	805	No protein	-	lncRNA	-	-
ENST00000654824.1	LINC02616-208	781	No protein	-	lncRNA	-	-
ENST00000720073.1	LINC02616-221	764	No protein	-	lncRNA	-	-
ENST00000720308.1	LINC02616-233	733	No protein	-	lncRNA	-	-
ENST00000720306.1	LINC02616-231	732	No protein	-	lncRNA	-	-
ENST00000720079.1	LINC02616-227	728	No protein	-	lncRNA	-	-
ENST00000720310.1	LINC02616-235	663	No protein	-	lncRNA	-	-
ENST00000720082.1	LINC02616-230	648	No protein	-	lncRNA	-	-
ENST00000720076.1	LINC02616-224	625	No protein	-	lncRNA	-	-
ENST00000720074.1	LINC02616-222	562	No protein	-	lncRNA	-	-
ENST00000720081.1	LINC02616-229	548	No protein	-	lncRNA	-	-
ENST00000508199.5	LINC02616-202	538	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000720072.1	LINC02616-220	522	No protein	-	lncRNA	-	-
ENST00000720075.1	LINC02616-223	503	No protein	-	lncRNA	-	-
ENST00000720078.1	LINC02616-226	451	No protein	-	lncRNA	-	-
ENST00000720080.1	LINC02616-228	444	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 1,775 bps,

Version

ENST00000665248.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000665248.1 LINC02616-214

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Transcript: ENST00000665248.1 LINC02616-214

Summary

About Us

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