Transcript: ENST00000665071.1 LINC02346-209

Description

long intergenic non-protein coding RNA 2346 [Source:HGNC Symbol;Acc:HGNC:53268]

Location

Chromosome 15: 26,028,337-26,053,122 forward strand.

About this transcript

This transcript has 4 exons and maps to 80 oligo probes.

Gene

This transcript is a product of gene ENSG00000206187.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000659702.1	LINC02346-206	1583	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000654579.1	LINC02346-204	4072	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000383019.2	LINC02346-201	1967	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000654388.2	LINC02346-203	1858	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000665071.1	LINC02346-209	1473	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000819401.1	LINC02346-218	1463	No protein	-	lncRNA	-	-
ENST00000819400.1	LINC02346-217	1363	No protein	-	lncRNA	-	-
ENST00000659028.1	LINC02346-205	1359	No protein	-	lncRNA	-	-
ENST00000819399.1	LINC02346-216	1306	No protein	-	lncRNA	-	-
ENST00000669776.1	LINC02346-213	1224	No protein	-	lncRNA	-	-
ENST00000669487.2	LINC02346-212	1173	No protein	-	lncRNA	-	-
ENST00000666764.2	LINC02346-211	1128	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000662457.2	LINC02346-208	1077	No protein	-	lncRNA	-	-
ENST00000819402.1	LINC02346-219	1067	No protein	-	lncRNA	-	-
ENST00000665430.1	LINC02346-210	1046	No protein	-	lncRNA	-	-
ENST00000659855.1	LINC02346-207	681	No protein	-	lncRNA	-	-
ENST00000819403.1	LINC02346-220	605	No protein	-	lncRNA	-	-
ENST00000557171.1	LINC02346-202	518	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000819397.1	LINC02346-214	361	No protein	-	lncRNA	-	-
ENST00000819398.1	LINC02346-215	352	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,473 bps,

Version

ENST00000665071.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000665071.1 LINC02346-209

Summary

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Transcript: ENST00000665071.1 LINC02346-209

Summary

About Us

Get help

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