Transcript: ENST00000664884.1 LINC02682-206

Description

long intergenic non-protein coding RNA 2682 [Source:HGNC Symbol;Acc:HGNC:54177]

Gene Synonyms

LNC-SOX6-1, TCONS_00019584

Location

Chromosome 11: 15,910,963-15,923,786 forward strand.

About this transcript

This transcript has 4 exons and maps to 94 oligo probes.

Gene

This transcript is a product of gene ENSG00000254661.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000757694.1	LINC02682-214	679	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000668376.1	LINC02682-209	1587	No protein	-	lncRNA	-	-
ENST00000667221.1	LINC02682-208	1377	No protein	-	lncRNA	-	-
ENST00000669725.2	LINC02682-211	1376	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000670509.1	LINC02682-213	1361	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000664817.1	LINC02682-205	1317	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000530418.2	LINC02682-201	1079	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000664116.1	LINC02682-204	1066	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000670379.1	LINC02682-212	1025	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000757700.1	LINC02682-220	973	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000663478.1	LINC02682-203	967	No protein	-	lncRNA	-	-
ENST00000668712.1	LINC02682-210	953	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000757698.1	LINC02682-218	905	No protein	-	lncRNA	-	-
ENST00000664884.1	LINC02682-206	875	No protein	-	lncRNA	-	-
ENST00000662912.1	LINC02682-202	820	No protein	-	lncRNA	-	-
ENST00000666053.1	LINC02682-207	790	No protein	-	lncRNA	-	-
ENST00000757699.1	LINC02682-219	731	No protein	-	lncRNA	-	-
ENST00000757695.1	LINC02682-215	486	No protein	-	lncRNA	-	-
ENST00000757701.1	LINC02682-221	430	No protein	-	lncRNA	-	-
ENST00000757696.1	LINC02682-216	388	No protein	-	lncRNA	-	-
ENST00000757697.1	LINC02682-217	339	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 875 bps,

Version

ENST00000664884.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000664884.1 LINC02682-206

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Transcript: ENST00000664884.1 LINC02682-206

Summary

About Us

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