Transcript: ENST00000664868.1 LINC01410-208

Description

long intergenic non-protein coding RNA 1410 [Source:HGNC Symbol;Acc:HGNC:50702]

Location

Chromosome 9: 62,802,780-62,813,486 forward strand.

About this transcript

This transcript has 5 exons and maps to 194 oligo probes.

Gene

This transcript is a product of gene ENSG00000238113.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000848981.1	LINC01410-227	1373	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000424345.6	LINC01410-201	2899	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000848970.1	LINC01410-216	2599	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000848968.1	LINC01410-214	2247	No protein	-	lncRNA	-	-
ENST00000848971.1	LINC01410-217	2217	No protein	-	lncRNA	-	-
ENST00000659835.1	LINC01410-205	2129	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000848973.1	LINC01410-219	2109	No protein	-	lncRNA	-	-
ENST00000848966.1	LINC01410-212	1729	No protein	-	lncRNA	-	-
ENST00000848965.1	LINC01410-211	1629	No protein	-	lncRNA	-	-
ENST00000663670.1	LINC01410-207	1604	No protein	-	lncRNA	-	-
ENST00000848972.1	LINC01410-218	1543	No protein	-	lncRNA	-	-
ENST00000848964.1	LINC01410-210	1520	No protein	-	lncRNA	-	-
ENST00000848975.1	LINC01410-221	1518	No protein	-	lncRNA	-	-
ENST00000848982.1	LINC01410-228	1453	No protein	-	lncRNA	-	-
ENST00000848977.1	LINC01410-223	1428	No protein	-	lncRNA	-	-
ENST00000848983.1	LINC01410-229	1418	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000664868.1	LINC01410-208	1366	No protein	-	lncRNA	-	-
ENST00000667536.1	LINC01410-209	1345	No protein	-	lncRNA	-	-
ENST00000660304.1	LINC01410-206	1331	No protein	-	lncRNA	-	-
ENST00000849328.1	LINC01410-237	1312	No protein	-	lncRNA	-	-
ENST00000848976.1	LINC01410-222	1284	No protein	-	lncRNA	-	-
ENST00000848978.1	LINC01410-224	1265	No protein	-	lncRNA	-	-
ENST00000848987.1	LINC01410-233	1235	No protein	-	lncRNA	-	-
ENST00000849325.1	LINC01410-234	1224	No protein	-	lncRNA	-	-
ENST00000848986.1	LINC01410-232	1208	No protein	-	lncRNA	-	-
ENST00000849327.1	LINC01410-236	1065	No protein	-	lncRNA	-	-
ENST00000849326.1	LINC01410-235	1021	No protein	-	lncRNA	-	-
ENST00000848974.1	LINC01410-220	976	No protein	-	lncRNA	-	-
ENST00000848969.1	LINC01410-215	888	No protein	-	lncRNA	-	-
ENST00000848979.1	LINC01410-225	796	No protein	-	lncRNA	-	-
ENST00000848984.1	LINC01410-230	725	No protein	-	lncRNA	-	-
ENST00000427509.5	LINC01410-202	647	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000848985.1	LINC01410-231	629	No protein	-	lncRNA	-	-
ENST00000848967.1	LINC01410-213	597	No protein	-	lncRNA	-	-
ENST00000848980.1	LINC01410-226	579	No protein	-	lncRNA	-	-
ENST00000849330.1	LINC01410-239	529	No protein	-	lncRNA	-	-
ENST00000650319.1	LINC01410-204	526	No protein	-	lncRNA	-	-
ENST00000452184.2	LINC01410-203	314	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000849329.1	LINC01410-238	310	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 1,366 bps,

Version

ENST00000664868.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000664868.1 LINC01410-208

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENST00000664868.1 LINC01410-208

Summary

About Us

Get help

Our sister sites

Follow us