Transcript: ENST00000664568.1 LINC00630-213

Description

long intergenic non-protein coding RNA 630 [Source:HGNC Symbol;Acc:HGNC:44263]

Location

Chromosome X: 102,769,161-102,817,611 forward strand.

About this transcript

This transcript has 3 exons and maps to 136 oligo probes.

Gene

This transcript is a product of gene ENSG00000223546.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000420471.6	LINC00630-202	2037	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000658813.1	LINC00630-209	3695	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000656628.1	LINC00630-208	3692	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000717313.1	LINC00630-220	3351	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000670178.1	LINC00630-216	2881	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000416381.2	LINC00630-201	2590	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000780054.1	LINC00630-250	2481	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000780057.1	LINC00630-253	2405	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000717315.1	LINC00630-222	2375	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000780040.1	LINC00630-236	2286	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000780055.1	LINC00630-251	2214	No protein	-	lncRNA	-	-
ENST00000780043.1	LINC00630-239	2150	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000440496.5	LINC00630-207	2101	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000717312.1	LINC00630-219	2086	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000780058.1	LINC00630-254	2009	No protein	-	lncRNA	-	-
ENST00000780031.1	LINC00630-227	2000	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000780061.1	LINC00630-257	1959	No protein	-	lncRNA	-	-
ENST00000780064.1	LINC00630-260	1943	No protein	-	lncRNA	-	-
ENST00000780059.1	LINC00630-255	1938	No protein	-	lncRNA	-	-
ENST00000780056.1	LINC00630-252	1915	No protein	-	lncRNA	-	-
ENST00000780066.1	LINC00630-262	1876	No protein	-	lncRNA	-	-
ENST00000780033.1	LINC00630-229	1874	No protein	-	lncRNA	-	-
ENST00000780028.1	LINC00630-224	1869	No protein	-	lncRNA	-	-
ENST00000780062.1	LINC00630-258	1858	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000717316.1	LINC00630-223	1801	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000780060.1	LINC00630-256	1760	No protein	-	lncRNA	-	-
ENST00000717314.1	LINC00630-221	1750	No protein	-	lncRNA	-	-
ENST00000780032.1	LINC00630-228	1678	No protein	-	lncRNA	-	-
ENST00000658880.1	LINC00630-210	1617	No protein	-	lncRNA	-	-
ENST00000780041.1	LINC00630-237	1602	No protein	-	lncRNA	-	-
ENST00000780035.1	LINC00630-231	1600	No protein	-	lncRNA	-	-
ENST00000780042.1	LINC00630-238	1592	No protein	-	lncRNA	-	-
ENST00000780044.1	LINC00630-240	1495	No protein	-	lncRNA	-	-
ENST00000780038.1	LINC00630-234	1477	No protein	-	lncRNA	-	-
ENST00000661018.1	LINC00630-211	1464	No protein	-	lncRNA	-	-
ENST00000780063.1	LINC00630-259	1461	No protein	-	lncRNA	-	-
ENST00000780045.1	LINC00630-241	1405	No protein	-	lncRNA	-	-
ENST00000429932.2	LINC00630-204	1403	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000663114.1	LINC00630-212	1389	No protein	-	lncRNA	-	-
ENST00000666631.1	LINC00630-214	1363	No protein	-	lncRNA	-	-
ENST00000780051.1	LINC00630-247	1350	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000780030.1	LINC00630-226	1273	No protein	-	lncRNA	-	-
ENST00000435966.2	LINC00630-206	1244	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000780036.1	LINC00630-232	1182	No protein	-	lncRNA	-	-
ENST00000780046.1	LINC00630-242	1141	No protein	-	lncRNA	-	-
ENST00000426528.5	LINC00630-203	1133	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000780039.1	LINC00630-235	1029	No protein	-	lncRNA	-	-
ENST00000780029.1	LINC00630-225	1012	No protein	-	lncRNA	-	-
ENST00000717311.1	LINC00630-218	982	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000780067.1	LINC00630-263	972	No protein	-	lncRNA	-	-
ENST00000780069.1	LINC00630-265	948	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000780065.1	LINC00630-261	935	No protein	-	lncRNA	-	-
ENST00000780053.1	LINC00630-249	929	No protein	-	lncRNA	-	-
ENST00000780049.1	LINC00630-245	927	No protein	-	lncRNA	-	-
ENST00000780050.1	LINC00630-246	903	No protein	-	lncRNA	-	-
ENST00000780037.1	LINC00630-233	900	No protein	-	lncRNA	-	-
ENST00000780071.1	LINC00630-267	898	No protein	-	lncRNA	-	-
ENST00000668536.2	LINC00630-215	885	No protein	-	lncRNA	-	-
ENST00000664568.1	LINC00630-213	870	No protein	-	lncRNA	-	-
ENST00000780034.1	LINC00630-230	848	No protein	-	lncRNA	-	-
ENST00000780048.1	LINC00630-244	839	No protein	-	lncRNA	-	-
ENST00000688915.2	LINC00630-217	790	No protein	-	lncRNA	-	-
ENST00000780068.1	LINC00630-264	783	No protein	-	lncRNA	-	-
ENST00000780047.1	LINC00630-243	743	No protein	-	lncRNA	-	-
ENST00000780070.1	LINC00630-266	697	No protein	-	lncRNA	-	-
ENST00000780075.1	LINC00630-271	628	No protein	-	lncRNA	-	-
ENST00000780052.1	LINC00630-248	583	No protein	-	lncRNA	-	-
ENST00000431616.5	LINC00630-205	561	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000780072.1	LINC00630-268	454	No protein	-	lncRNA	-	-
ENST00000780073.1	LINC00630-269	333	No protein	-	lncRNA	-	-
ENST00000780074.1	LINC00630-270	329	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 870 bps,

Version

ENST00000664568.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000664568.1 LINC00630-213

Summary

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Transcript: ENST00000664568.1 LINC00630-213

Summary

About Us

Get help

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