Transcript: ENST00000664341.1 LINC01563-204

Description

long intergenic non-protein coding RNA 1563 [Source:HGNC Symbol;Acc:HGNC:51343]

Location

Chromosome 17: 21,084,484-21,090,516 forward strand.

About this transcript

This transcript has 2 exons and maps to 94 oligo probes.

Gene

This transcript is a product of gene ENSG00000236819.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000812095.1	LINC01563-210	385	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000671326.1	LINC01563-209	2073	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000659567.1	LINC01563-203	1951	No protein	-	lncRNA	-	-
ENST00000666441.1	LINC01563-207	1159	No protein	-	lncRNA	-	-
ENST00000664838.2	LINC01563-206	1057	No protein	-	lncRNA	-	-
ENST00000656070.1	LINC01563-202	917	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000664827.3	LINC01563-205	836	No protein	-	lncRNA	-	-
ENST00000668335.2	LINC01563-208	813	No protein	-	lncRNA	-	-
ENST00000812096.1	LINC01563-211	773	No protein	-	lncRNA	-	-
ENST00000456235.1	LINC01563-201	750	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000664341.1	LINC01563-204	650	No protein	-	lncRNA	-	-
ENST00000812098.1	LINC01563-213	594	No protein	-	lncRNA	-	-
ENST00000812097.1	LINC01563-212	482	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 650 bps,

Version

ENST00000664341.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000664341.1 LINC01563-204

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Transcript: ENST00000664341.1 LINC01563-204

Summary

About Us

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