Transcript: ENST00000664285.2 LINC01255-226

Description

long intergenic non-protein coding RNA 1255 [Source:HGNC Symbol;Acc:HGNC:49871]

Location

Chromosome 18: 11,490,016-11,506,983 forward strand.

About this transcript

This transcript has 5 exons and maps to 159 oligo probes.

Gene

This transcript is a product of gene ENSG00000267252.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000827562.1	LINC01255-241	412	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000668070.1	LINC01255-236	1671	No protein	-	lncRNA	-	-
ENST00000657252.2	LINC01255-214	1658	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000669406.1	LINC01255-239	1601	No protein	-	lncRNA	-	-
ENST00000658793.1	LINC01255-216	1518	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000661916.1	LINC01255-223	1462	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000665603.1	LINC01255-231	1394	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000656361.1	LINC01255-213	1364	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000661251.1	LINC01255-221	1300	No protein	-	lncRNA	-	-
ENST00000659512.1	LINC01255-218	1200	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000827567.1	LINC01255-246	1183	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000664813.1	LINC01255-228	1045	No protein	-	lncRNA	-	-
ENST00000827580.1	LINC01255-259	1031	No protein	-	lncRNA	-	-
ENST00000666911.1	LINC01255-235	1012	No protein	-	lncRNA	-	-
ENST00000654285.1	LINC01255-207	995	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000655487.2	LINC01255-211	950	No protein	-	lncRNA	-	-
ENST00000670553.1	LINC01255-240	948	No protein	-	lncRNA	-	-
ENST00000661687.1	LINC01255-222	947	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000655334.1	LINC01255-210	923	No protein	-	lncRNA	-	-
ENST00000658156.1	LINC01255-215	913	No protein	-	lncRNA	-	-
ENST00000827574.1	LINC01255-253	905	No protein	-	lncRNA	-	-
ENST00000664427.1	LINC01255-227	878	No protein	-	lncRNA	-	-
ENST00000655180.1	LINC01255-209	859	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000654376.1	LINC01255-208	858	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000664285.2	LINC01255-226	852	No protein	-	lncRNA	-	-
ENST00000665083.1	LINC01255-229	811	No protein	-	lncRNA	-	-
ENST00000666178.1	LINC01255-233	803	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000827581.1	LINC01255-260	786	No protein	-	lncRNA	-	-
ENST00000665383.2	LINC01255-230	781	No protein	-	lncRNA	-	-
ENST00000827571.1	LINC01255-250	774	No protein	-	lncRNA	-	-
ENST00000827572.1	LINC01255-251	773	No protein	-	lncRNA	-	-
ENST00000663721.1	LINC01255-225	743	No protein	-	lncRNA	-	-
ENST00000827577.1	LINC01255-256	735	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000660965.2	LINC01255-220	720	No protein	-	lncRNA	-	-
ENST00000827578.1	LINC01255-257	713	No protein	-	lncRNA	-	-
ENST00000591318.1	LINC01255-205	708	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000659316.1	LINC01255-217	696	No protein	-	lncRNA	-	-
ENST00000660761.1	LINC01255-219	693	No protein	-	lncRNA	-	-
ENST00000827576.1	LINC01255-255	683	No protein	-	lncRNA	-	-
ENST00000827566.1	LINC01255-245	672	No protein	-	lncRNA	-	-
ENST00000666190.1	LINC01255-234	645	No protein	-	lncRNA	-	-
ENST00000827568.1	LINC01255-247	607	No protein	-	lncRNA	-	-
ENST00000587189.6	LINC01255-203	593	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000656057.2	LINC01255-212	592	No protein	-	lncRNA	-	-
ENST00000591431.2	LINC01255-206	584	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000586947.7	LINC01255-202	583	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000827585.1	LINC01255-264	563	No protein	-	lncRNA	-	-
ENST00000827579.1	LINC01255-258	561	No protein	-	lncRNA	-	-
ENST00000827573.1	LINC01255-252	557	No protein	-	lncRNA	-	-
ENST00000589566.1	LINC01255-204	551	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000827563.1	LINC01255-242	546	No protein	-	lncRNA	-	-
ENST00000827575.1	LINC01255-254	544	No protein	-	lncRNA	-	-
ENST00000669156.2	LINC01255-238	529	No protein	-	lncRNA	-	-
ENST00000827584.1	LINC01255-263	529	No protein	-	lncRNA	-	-
ENST00000665636.1	LINC01255-232	512	No protein	-	lncRNA	-	-
ENST00000827583.1	LINC01255-262	501	No protein	-	lncRNA	-	-
ENST00000827582.1	LINC01255-261	485	No protein	-	lncRNA	-	-
ENST00000827564.1	LINC01255-243	470	No protein	-	lncRNA	-	-
ENST00000586145.1	LINC01255-201	463	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000668120.2	LINC01255-237	453	No protein	-	lncRNA	-	-
ENST00000827565.1	LINC01255-244	442	No protein	-	lncRNA	-	-
ENST00000663415.1	LINC01255-224	368	No protein	-	lncRNA	-	-
ENST00000827570.1	LINC01255-249	366	No protein	-	lncRNA	-	-
ENST00000827569.1	LINC01255-248	269	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 852 bps,

Version

ENST00000664285.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000664285.2 LINC01255-226

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Transcript: ENST00000664285.2 LINC01255-226

Summary

About Us

Get help

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