Transcript: ENST00000664271.2 LINC01370-205

Description

long intergenic non-protein coding RNA 1370 [Source:HGNC Symbol;Acc:HGNC:50608]

Gene Synonyms

HI-LNC25

Location

Chromosome 20: 40,004,247-40,008,529 forward strand.

About this transcript

This transcript has 2 exons and maps to 207 oligo probes.

Gene

This transcript is a product of gene ENSG00000237767.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000716850.1	LINC01370-213	1018	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000669808.2	LINC01370-210	2591	No protein	-	lncRNA	-	-
ENST00000664271.2	LINC01370-205	2512	No protein	-	lncRNA	-	-
ENST00000667567.2	LINC01370-207	2177	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000665038.2	LINC01370-206	2084	No protein	-	lncRNA	-	-
ENST00000722245.1	LINC01370-223	1934	No protein	-	lncRNA	-	-
ENST00000722246.1	LINC01370-224	1736	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000722243.1	LINC01370-221	1718	No protein	-	lncRNA	-	-
ENST00000668047.2	LINC01370-208	1645	No protein	-	lncRNA	-	-
ENST00000722244.1	LINC01370-222	1611	No protein	-	lncRNA	-	-
ENST00000656861.2	LINC01370-204	1544	No protein	-	lncRNA	-	-
ENST00000722248.1	LINC01370-226	1531	No protein	-	lncRNA	-	-
ENST00000670996.2	LINC01370-211	1393	No protein	-	lncRNA	-	-
ENST00000423153.2	LINC01370-201	1324	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000722247.1	LINC01370-225	1306	No protein	-	lncRNA	-	-
ENST00000722237.1	LINC01370-215	1198	No protein	-	lncRNA	-	-
ENST00000669216.1	LINC01370-209	1196	No protein	-	lncRNA	-	-
ENST00000722236.1	LINC01370-214	1181	No protein	-	lncRNA	-	-
ENST00000445606.3	LINC01370-203	1095	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000701153.2	LINC01370-212	1056	No protein	-	lncRNA	-	-
ENST00000432633.2	LINC01370-202	1017	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000722238.1	LINC01370-216	989	No protein	-	lncRNA	-	-
ENST00000722239.1	LINC01370-217	968	No protein	-	lncRNA	-	-
ENST00000722240.1	LINC01370-218	943	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000722242.1	LINC01370-220	744	No protein	-	lncRNA	-	-
ENST00000722251.1	LINC01370-229	651	No protein	-	lncRNA	-	-
ENST00000722249.1	LINC01370-227	509	No protein	-	lncRNA	-	-
ENST00000722250.1	LINC01370-228	509	No protein	-	lncRNA	-	-
ENST00000722241.1	LINC01370-219	475	No protein	-	lncRNA	-	-
ENST00000722253.1	LINC01370-231	420	No protein	-	lncRNA	-	-
ENST00000722252.1	LINC01370-230	382	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 2,512 bps,

Version

ENST00000664271.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000664271.2 LINC01370-205

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENST00000664271.2 LINC01370-205

Summary

About Us

Get help

Our sister sites

Follow us