Transcript: ENST00000663809.3 AFDN-DT-205

Description

AFDN divergent transcript [Source:HGNC Symbol;Acc:HGNC:21236]

Gene Synonyms

AFDN-AS1, C6ORF124, DJ431P23.3, HGC6.4, MLLT4-AS1, XBP1SBM

Location

Chromosome 6: 167,823,342-167,826,842 reverse strand.

About this transcript

This transcript has 3 exons and maps to 332 oligo probes.

Gene

This transcript is a product of gene ENSG00000198221.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000715776.1	AFDN-DT-218	1255	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000669546.5	AFDN-DT-206	4124	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000693058.2	AFDN-DT-214	2720	No protein	-	lncRNA	-	-
ENST00000794593.1	AFDN-DT-266	2315	No protein	-	lncRNA	-	-
ENST00000794629.1	AFDN-DT-302	1864	No protein	-	lncRNA	-	-
ENST00000366822.4	AFDN-DT-201	1828	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000794566.1	AFDN-DT-239	1756	No protein	-	lncRNA	-	-
ENST00000685931.2	AFDN-DT-207	1755	No protein	-	lncRNA	-	-
ENST00000794567.1	AFDN-DT-240	1745	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000794604.1	AFDN-DT-277	1692	No protein	-	lncRNA	-	-
ENST00000687268.2	AFDN-DT-210	1677	No protein	-	lncRNA	-	-
ENST00000663809.3	AFDN-DT-205	1669	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000495520.6	AFDN-DT-204	1665	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000794635.1	AFDN-DT-308	1607	No protein	-	lncRNA	-	-
ENST00000794565.1	AFDN-DT-238	1460	No protein	-	lncRNA	-	-
ENST00000794547.1	AFDN-DT-220	1417	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000794552.1	AFDN-DT-225	1412	No protein	-	lncRNA	-	-
ENST00000688535.2	AFDN-DT-211	1380	No protein	-	lncRNA	-	-
ENST00000794550.1	AFDN-DT-223	1268	No protein	-	lncRNA	-	-
ENST00000794558.1	AFDN-DT-231	1265	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000794573.1	AFDN-DT-246	1247	No protein	-	lncRNA	-	-
ENST00000794549.1	AFDN-DT-222	1244	No protein	-	lncRNA	-	-
ENST00000794561.1	AFDN-DT-234	1204	No protein	-	lncRNA	-	-
ENST00000794574.1	AFDN-DT-247	1195	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000794546.1	AFDN-DT-219	1193	No protein	-	lncRNA	-	-
ENST00000794606.1	AFDN-DT-279	1180	No protein	-	lncRNA	-	-
ENST00000794553.1	AFDN-DT-226	1174	No protein	-	lncRNA	-	-
ENST00000692751.2	AFDN-DT-213	1146	No protein	-	lncRNA	-	-
ENST00000794557.1	AFDN-DT-230	1142	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000794597.1	AFDN-DT-270	1124	No protein	-	lncRNA	-	-
ENST00000794563.1	AFDN-DT-236	1112	No protein	-	lncRNA	-	-
ENST00000794562.1	AFDN-DT-235	1070	No protein	-	lncRNA	-	-
ENST00000794548.1	AFDN-DT-221	1068	No protein	-	lncRNA	-	-
ENST00000794608.1	AFDN-DT-281	1064	No protein	-	lncRNA	-	-
ENST00000701277.1	AFDN-DT-217	1040	No protein	-	lncRNA	-	-
ENST00000794554.1	AFDN-DT-227	1031	No protein	-	lncRNA	-	-
ENST00000794556.1	AFDN-DT-229	1023	No protein	-	lncRNA	-	-
ENST00000794555.1	AFDN-DT-228	1015	No protein	-	lncRNA	-	-
ENST00000794598.1	AFDN-DT-271	1007	No protein	-	lncRNA	-	-
ENST00000794607.1	AFDN-DT-280	1000	No protein	-	lncRNA	-	-
ENST00000794621.1	AFDN-DT-294	982	No protein	-	lncRNA	-	-
ENST00000794587.1	AFDN-DT-260	975	No protein	-	lncRNA	-	-
ENST00000794575.1	AFDN-DT-248	960	No protein	-	lncRNA	-	-
ENST00000686823.2	AFDN-DT-209	943	No protein	-	lncRNA	-	-
ENST00000794559.1	AFDN-DT-232	923	No protein	-	lncRNA	-	-
ENST00000794618.1	AFDN-DT-291	919	No protein	-	lncRNA	-	-
ENST00000794616.1	AFDN-DT-289	882	No protein	-	lncRNA	-	-
ENST00000794580.1	AFDN-DT-253	867	No protein	-	lncRNA	-	-
ENST00000794581.1	AFDN-DT-254	867	No protein	-	lncRNA	-	-
ENST00000689959.2	AFDN-DT-212	857	No protein	-	lncRNA	-	-
ENST00000794551.1	AFDN-DT-224	782	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000794564.1	AFDN-DT-237	735	No protein	-	lncRNA	-	-
ENST00000794628.1	AFDN-DT-301	701	No protein	-	lncRNA	-	-
ENST00000794576.1	AFDN-DT-249	699	No protein	-	lncRNA	-	-
ENST00000794560.1	AFDN-DT-233	669	No protein	-	lncRNA	-	-
ENST00000794609.1	AFDN-DT-282	655	No protein	-	lncRNA	-	-
ENST00000794627.1	AFDN-DT-300	652	No protein	-	lncRNA	-	-
ENST00000794583.1	AFDN-DT-256	651	No protein	-	lncRNA	-	-
ENST00000794634.1	AFDN-DT-307	637	No protein	-	lncRNA	-	-
ENST00000794632.1	AFDN-DT-305	636	No protein	-	lncRNA	-	-
ENST00000794623.1	AFDN-DT-296	635	No protein	-	lncRNA	-	-
ENST00000794611.1	AFDN-DT-284	621	No protein	-	lncRNA	-	-
ENST00000794590.1	AFDN-DT-263	613	No protein	-	lncRNA	-	-
ENST00000794569.1	AFDN-DT-242	611	No protein	-	lncRNA	-	-
ENST00000686435.2	AFDN-DT-208	608	No protein	-	lncRNA	-	-
ENST00000794571.1	AFDN-DT-244	604	No protein	-	lncRNA	-	-
ENST00000794617.1	AFDN-DT-290	602	No protein	-	lncRNA	-	-
ENST00000794620.1	AFDN-DT-293	599	No protein	-	lncRNA	-	-
ENST00000794586.1	AFDN-DT-259	595	No protein	-	lncRNA	-	-
ENST00000794626.1	AFDN-DT-299	594	No protein	-	lncRNA	-	-
ENST00000794603.1	AFDN-DT-276	593	No protein	-	lncRNA	-	-
ENST00000794619.1	AFDN-DT-292	585	No protein	-	lncRNA	-	-
ENST00000425438.3	AFDN-DT-203	578	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000794613.1	AFDN-DT-286	577	No protein	-	lncRNA	-	-
ENST00000693293.2	AFDN-DT-215	574	No protein	-	lncRNA	-	-
ENST00000794596.1	AFDN-DT-269	574	No protein	-	lncRNA	-	-
ENST00000794612.1	AFDN-DT-285	568	No protein	-	lncRNA	-	-
ENST00000794600.1	AFDN-DT-273	567	No protein	-	lncRNA	-	-
ENST00000794605.1	AFDN-DT-278	567	No protein	-	lncRNA	-	-
ENST00000794588.1	AFDN-DT-261	566	No protein	-	lncRNA	-	-
ENST00000794601.1	AFDN-DT-274	566	No protein	-	lncRNA	-	-
ENST00000701075.2	AFDN-DT-216	557	No protein	-	lncRNA	-	-
ENST00000794637.1	AFDN-DT-310	557	No protein	-	lncRNA	-	-
ENST00000794572.1	AFDN-DT-245	556	No protein	-	lncRNA	-	-
ENST00000794624.1	AFDN-DT-297	544	No protein	-	lncRNA	-	-
ENST00000794615.1	AFDN-DT-288	539	No protein	-	lncRNA	-	-
ENST00000794631.1	AFDN-DT-304	534	No protein	-	lncRNA	-	-
ENST00000794591.1	AFDN-DT-264	533	No protein	-	lncRNA	-	-
ENST00000794602.1	AFDN-DT-275	530	No protein	-	lncRNA	-	-
ENST00000794599.1	AFDN-DT-272	521	No protein	-	lncRNA	-	-
ENST00000794568.1	AFDN-DT-241	516	No protein	-	lncRNA	-	-
ENST00000794582.1	AFDN-DT-255	503	No protein	-	lncRNA	-	-
ENST00000794584.1	AFDN-DT-257	503	No protein	-	lncRNA	-	-
ENST00000794585.1	AFDN-DT-258	500	No protein	-	lncRNA	-	-
ENST00000794636.1	AFDN-DT-309	499	No protein	-	lncRNA	-	-
ENST00000794610.1	AFDN-DT-283	498	No protein	-	lncRNA	-	-
ENST00000794578.1	AFDN-DT-251	497	No protein	-	lncRNA	-	-
ENST00000794633.1	AFDN-DT-306	475	No protein	-	lncRNA	-	-
ENST00000794570.1	AFDN-DT-243	463	No protein	-	lncRNA	-	-
ENST00000794622.1	AFDN-DT-295	463	No protein	-	lncRNA	-	-
ENST00000794594.1	AFDN-DT-267	459	No protein	-	lncRNA	-	-
ENST00000794577.1	AFDN-DT-250	450	No protein	-	lncRNA	-	-
ENST00000794589.1	AFDN-DT-262	440	No protein	-	lncRNA	-	-
ENST00000794630.1	AFDN-DT-303	434	No protein	-	lncRNA	-	-
ENST00000794592.1	AFDN-DT-265	430	No protein	-	lncRNA	-	-
ENST00000794614.1	AFDN-DT-287	425	No protein	-	lncRNA	-	-
ENST00000794595.1	AFDN-DT-268	418	No protein	-	lncRNA	-	-
ENST00000794579.1	AFDN-DT-252	391	No protein	-	lncRNA	-	-
ENST00000794625.1	AFDN-DT-298	389	No protein	-	lncRNA	-	-
ENST00000417244.1	AFDN-DT-202	182	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,669 bps,

Version

ENST00000663809.3

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000663809.3 AFDN-DT-205

Summary

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Transcript: ENST00000663809.3 AFDN-DT-205

Summary

About Us

Get help

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