Transcript: ENST00000663702.1 LINC00702-212

Description

long intergenic non-protein coding RNA 702 [Source:HGNC Symbol;Acc:HGNC:44676]

Location

Chromosome 10: 4,234,595-4,243,810 reverse strand.

About this transcript

This transcript has 3 exons and maps to 157 oligo probes.

Gene

This transcript is a product of gene ENSG00000233117.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000608792.1	LINC00702-203	6300	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000665013.1	LINC00702-213	2074	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000658856.3	LINC00702-207	2016	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000841473.1	LINC00702-218	2014	No protein	-	lncRNA	-	-
ENST00000841474.1	LINC00702-219	2001	No protein	-	lncRNA	-	-
ENST00000662921.1	LINC00702-211	1983	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000659601.1	LINC00702-209	1951	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000841475.1	LINC00702-220	1949	No protein	-	lncRNA	-	-
ENST00000655688.1	LINC00702-205	1882	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000658440.1	LINC00702-206	1879	No protein	-	lncRNA	-	-
ENST00000668893.1	LINC00702-216	1717	No protein	-	lncRNA	-	-
ENST00000661427.1	LINC00702-210	1704	No protein	-	lncRNA	-	-
ENST00000668887.1	LINC00702-215	1659	No protein	-	lncRNA	-	-
ENST00000663702.1	LINC00702-212	1401	No protein	-	lncRNA	-	-
ENST00000841476.1	LINC00702-221	1112	No protein	-	lncRNA	-	-
ENST00000666481.1	LINC00702-214	1073	No protein	-	lncRNA	-	-
ENST00000454470.2	LINC00702-202	864	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000659068.1	LINC00702-208	826	No protein	-	lncRNA	-	-
ENST00000841472.1	LINC00702-217	536	No protein	-	lncRNA	-	-
ENST00000418372.1	LINC00702-201	446	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000841477.1	LINC00702-222	423	No protein	-	lncRNA	-	-
ENST00000841478.1	LINC00702-223	385	No protein	-	lncRNA	-	-
ENST00000654788.1	LINC00702-204	382	No protein	-	lncRNA	-	-
ENST00000841480.1	LINC00702-225	358	No protein	-	lncRNA	-	-
ENST00000841479.1	LINC00702-224	354	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,401 bps,

Version

ENST00000663702.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000663702.1 LINC00702-212

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Transcript: ENST00000663702.1 LINC00702-212

Summary

About Us

Get help

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