Transcript: ENST00000663680.3 PDGFA-DT-204

Description

PDGFA divergent transcript [Source:HGNC Symbol;Acc:HGNC:55865]

Gene Synonyms

HRAT92

Location

Chromosome 7: 522,519-525,244 forward strand.

About this transcript

This transcript has 3 exons and maps to 121 oligo probes.

Gene

This transcript is a product of gene ENSG00000223855.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000797634.1	PDGFA-DT-210	1537	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000452622.1	PDGFA-DT-201	3506	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000797648.1	PDGFA-DT-224	1519	No protein	-	lncRNA	-	-
ENST00000797646.1	PDGFA-DT-222	1405	No protein	-	lncRNA	-	-
ENST00000662957.4	PDGFA-DT-203	1328	No protein	-	lncRNA	-	-
ENST00000797643.1	PDGFA-DT-219	1245	No protein	-	lncRNA	-	-
ENST00000656962.2	PDGFA-DT-202	1223	No protein	-	lncRNA	-	-
ENST00000688093.3	PDGFA-DT-205	1175	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000797635.1	PDGFA-DT-211	1040	No protein	-	lncRNA	-	-
ENST00000702988.2	PDGFA-DT-209	871	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000797644.1	PDGFA-DT-220	870	No protein	-	lncRNA	-	-
ENST00000689970.2	PDGFA-DT-207	869	No protein	-	lncRNA	-	-
ENST00000689546.3	PDGFA-DT-206	865	No protein	-	lncRNA	-	-
ENST00000797638.1	PDGFA-DT-214	844	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000797649.1	PDGFA-DT-225	788	No protein	-	lncRNA	-	-
ENST00000797640.1	PDGFA-DT-216	778	No protein	-	lncRNA	-	-
ENST00000663680.3	PDGFA-DT-204	777	No protein	-	lncRNA	-	-
ENST00000797645.1	PDGFA-DT-221	736	No protein	-	lncRNA	-	-
ENST00000797636.1	PDGFA-DT-212	731	No protein	-	lncRNA	-	-
ENST00000797652.1	PDGFA-DT-228	698	No protein	-	lncRNA	-	-
ENST00000797647.1	PDGFA-DT-223	679	No protein	-	lncRNA	-	-
ENST00000797641.1	PDGFA-DT-217	667	No protein	-	lncRNA	-	-
ENST00000690212.3	PDGFA-DT-208	658	No protein	-	lncRNA	-	-
ENST00000797639.1	PDGFA-DT-215	655	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000797637.1	PDGFA-DT-213	652	No protein	-	lncRNA	-	-
ENST00000797654.1	PDGFA-DT-230	608	No protein	-	lncRNA	-	-
ENST00000797642.1	PDGFA-DT-218	607	No protein	-	lncRNA	-	-
ENST00000797650.1	PDGFA-DT-226	582	No protein	-	lncRNA	-	-
ENST00000797651.1	PDGFA-DT-227	548	No protein	-	lncRNA	-	-
ENST00000797653.1	PDGFA-DT-229	505	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 777 bps,

Version

ENST00000663680.3

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000663680.3 PDGFA-DT-204

Summary

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Transcript: ENST00000663680.3 PDGFA-DT-204

Summary

About Us

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