Transcript: ENST00000662008.1 CASC22-208

Description

cancer susceptibility 22 [Source:HGNC Symbol;Acc:HGNC:50627]

Gene Synonyms

LINC01373, LINCRNA-ENST00000515084, TCONS_00024290

Location

Chromosome 16: 52,271,592-52,280,296 forward strand.

About this transcript

This transcript has 5 exons and maps to 152 oligo probes.

Gene

This transcript is a product of gene ENSG00000260887.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000717485.1	CASC22-213	625	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000668506.1	CASC22-210	1353	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000665777.1	CASC22-209	1243	No protein	-	lncRNA	-	-
ENST00000656784.1	CASC22-204	848	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000653084.1	CASC22-203	823	No protein	-	lncRNA	-	-
ENST00000661626.1	CASC22-206	814	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000628396.1	CASC22-202	802	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000668976.1	CASC22-211	785	No protein	-	lncRNA	-	-
ENST00000662008.1	CASC22-208	781	No protein	-	lncRNA	-	-
ENST00000670500.1	CASC22-212	750	No protein	-	lncRNA	-	-
ENST00000660275.1	CASC22-205	642	No protein	-	lncRNA	-	-
ENST00000661876.1	CASC22-207	535	No protein	-	lncRNA	-	-
ENST00000569713.1	CASC22-201	386	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 781 bps,

Version

ENST00000662008.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000662008.1 CASC22-208

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Transcript: ENST00000662008.1 CASC22-208

Summary

About Us

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