Transcript: ENST00000661982.1 LINC01210-212

Description

long intergenic non-protein coding RNA 1210 [Source:HGNC Symbol;Acc:HGNC:49642]

Location

Chromosome 3: 137,771,853-137,780,882 forward strand.

About this transcript

This transcript has 5 exons, is associated with 4167 variant alleles and maps to 315 oligo probes.

Gene

This transcript is a product of gene ENSG00000239513.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000661982.1	LINC01210-212	1577	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000666528.1	LINC01210-216	2255	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000471091.7	LINC01210-203	1594	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000654543.2	LINC01210-207	1578	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000654610.1	LINC01210-208	1549	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000655048.1	LINC01210-209	1542	No protein	-	lncRNA	-	-
ENST00000671510.1	LINC01210-219	1516	No protein	-	lncRNA	-	-
ENST00000664320.1	LINC01210-215	1499	No protein	-	lncRNA	-	-
ENST00000667692.1	LINC01210-218	1450	No protein	-	lncRNA	-	-
ENST00000662180.1	LINC01210-214	1448	No protein	-	lncRNA	-	-
ENST00000660613.1	LINC01210-210	1425	No protein	-	lncRNA	-	-
ENST00000774633.1	LINC01210-225	1424	No protein	-	lncRNA	-	-
ENST00000774624.1	LINC01210-221	1367	No protein	-	lncRNA	-	-
ENST00000478772.6	LINC01210-204	1292	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000774635.1	LINC01210-226	1254	No protein	-	lncRNA	-	-
ENST00000654450.2	LINC01210-206	1242	No protein	-	lncRNA	-	-
ENST00000660863.1	LINC01210-211	1239	No protein	-	lncRNA	-	-
ENST00000469216.3	LINC01210-202	1191	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000652948.1	LINC01210-205	1172	No protein	-	lncRNA	-	-
ENST00000662157.1	LINC01210-213	1130	No protein	-	lncRNA	-	-
ENST00000774622.1	LINC01210-220	947	No protein	-	lncRNA	-	-
ENST00000465283.7	LINC01210-201	859	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000774629.1	LINC01210-223	776	No protein	-	lncRNA	-	-
ENST00000774626.1	LINC01210-222	689	No protein	-	lncRNA	-	-
ENST00000667229.1	LINC01210-217	582	No protein	-	lncRNA	-	-
ENST00000774631.1	LINC01210-224	574	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 1,577 bps,

Version

ENST00000661982.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.

Transcript: ENST00000661982.1 LINC01210-212

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Transcript: ENST00000661982.1 LINC01210-212

Summary

About Us

Get help

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