Transcript: ENST00000661950.1 LINC00989-208

Description

long intergenic non-protein coding RNA 989 [Source:HGNC Symbol;Acc:HGNC:48918]

Location

Chromosome 4: 79,492,612-79,587,094 forward strand.

About this transcript

This transcript has 4 exons and maps to 148 oligo probes.

Gene

This transcript is a product of gene ENSG00000250334.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000767419.1	LINC00989-220	1276	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000661529.2	LINC00989-207	2799	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000661950.1	LINC00989-208	2662	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000767432.1	LINC00989-233	2459	No protein	-	lncRNA	-	-
ENST00000767434.1	LINC00989-235	2430	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000654276.3	LINC00989-204	2339	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000685595.1	LINC00989-213	2145	No protein	-	lncRNA	-	-
ENST00000702315.1	LINC00989-218	2133	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000508174.7	LINC00989-201	2095	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000691929.2	LINC00989-216	2086	No protein	-	lncRNA	-	-
ENST00000515544.2	LINC00989-203	2080	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000767433.1	LINC00989-234	1968	No protein	-	lncRNA	-	-
ENST00000767444.1	LINC00989-245	1647	No protein	-	lncRNA	-	-
ENST00000767430.1	LINC00989-231	1615	No protein	-	lncRNA	-	-
ENST00000767435.1	LINC00989-236	1539	No protein	-	lncRNA	-	-
ENST00000692563.1	LINC00989-217	1476	No protein	-	lncRNA	-	-
ENST00000767438.1	LINC00989-239	1469	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000767436.1	LINC00989-237	1464	No protein	-	lncRNA	-	-
ENST00000671684.1	LINC00989-212	1445	No protein	-	lncRNA	-	-
ENST00000685699.2	LINC00989-214	1429	No protein	-	lncRNA	-	-
ENST00000767443.1	LINC00989-244	1396	No protein	-	lncRNA	-	-
ENST00000685909.1	LINC00989-215	1384	No protein	-	lncRNA	-	-
ENST00000767442.1	LINC00989-243	1380	No protein	-	lncRNA	-	-
ENST00000767423.1	LINC00989-224	1364	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000670961.4	LINC00989-211	1337	No protein	-	lncRNA	-	-
ENST00000654687.2	LINC00989-205	1323	No protein	-	lncRNA	-	-
ENST00000656371.3	LINC00989-206	1302	No protein	-	lncRNA	-	-
ENST00000767437.1	LINC00989-238	1292	No protein	-	lncRNA	-	-
ENST00000767420.1	LINC00989-221	1267	No protein	-	lncRNA	-	-
ENST00000767421.1	LINC00989-222	1240	No protein	-	lncRNA	-	-
ENST00000767422.1	LINC00989-223	1179	No protein	-	lncRNA	-	-
ENST00000767439.1	LINC00989-240	1119	No protein	-	lncRNA	-	-
ENST00000767424.1	LINC00989-225	1104	No protein	-	lncRNA	-	-
ENST00000767425.1	LINC00989-226	1075	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000767426.1	LINC00989-227	1054	No protein	-	lncRNA	-	-
ENST00000668018.1	LINC00989-210	925	No protein	-	lncRNA	-	-
ENST00000664228.1	LINC00989-209	904	No protein	-	lncRNA	-	-
ENST00000767431.1	LINC00989-232	904	No protein	-	lncRNA	-	-
ENST00000767429.1	LINC00989-230	843	No protein	-	lncRNA	-	-
ENST00000767440.1	LINC00989-241	738	No protein	-	lncRNA	-	-
ENST00000767427.1	LINC00989-228	704	No protein	-	lncRNA	-	-
ENST00000767428.1	LINC00989-229	599	No protein	-	lncRNA	-	-
ENST00000767441.1	LINC00989-242	562	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000702341.1	LINC00989-219	536	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000513155.2	LINC00989-202	416	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000767445.1	LINC00989-246	406	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 2,662 bps,

Version

ENST00000661950.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000661950.1 LINC00989-208

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Transcript: ENST00000661950.1 LINC00989-208

Summary

About Us

Get help

Our sister sites

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