Transcript: ENST00000661763.1 GRASLND-217

Description

glycosaminoglycan regulatory associated long non-coding RNA [Source:HGNC Symbol;Acc:HGNC:30963]

Gene Synonyms

RNF144A-AS1

Location

Chromosome 2: 6,913,914-6,918,720 reverse strand.

About this transcript

This transcript has 3 exons and maps to 300 oligo probes.

Gene

This transcript is a product of gene ENSG00000228203.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000659594.1	GRASLND-213	3048	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000668067.1	GRASLND-221	3206	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000668478.2	GRASLND-223	2995	No protein	-	lncRNA	-	-
ENST00000424351.2	GRASLND-202	2992	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000656329.1	GRASLND-211	2902	No protein	-	lncRNA	-	-
ENST00000437589.4	GRASLND-204	2850	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000669858.1	GRASLND-224	2758	No protein	-	lncRNA	-	-
ENST00000654458.1	GRASLND-208	2735	No protein	-	lncRNA	-	-
ENST00000666155.2	GRASLND-219	2575	No protein	-	lncRNA	-	-
ENST00000653376.2	GRASLND-206	2489	No protein	-	lncRNA	-	-
ENST00000657786.1	GRASLND-212	2448	No protein	-	lncRNA	-	-
ENST00000663387.1	GRASLND-218	2407	No protein	-	lncRNA	-	-
ENST00000654416.2	GRASLND-207	2398	No protein	-	lncRNA	-	-
ENST00000655735.2	GRASLND-210	2368	No protein	-	lncRNA	-	-
ENST00000660837.1	GRASLND-215	2355	No protein	-	lncRNA	-	-
ENST00000418970.8	GRASLND-201	2349	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000670983.2	GRASLND-225	2329	No protein	-	lncRNA	-	-
ENST00000666343.1	GRASLND-220	2297	No protein	-	lncRNA	-	-
ENST00000661352.1	GRASLND-216	2169	No protein	-	lncRNA	-	-
ENST00000661763.1	GRASLND-217	2158	No protein	-	lncRNA	-	-
ENST00000671313.1	GRASLND-226	2078	No protein	-	lncRNA	-	-
ENST00000660102.1	GRASLND-214	1863	No protein	-	lncRNA	-	-
ENST00000779914.1	GRASLND-235	1776	No protein	-	lncRNA	-	-
ENST00000779906.1	GRASLND-227	1717	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000668217.1	GRASLND-222	1567	No protein	-	lncRNA	-	-
ENST00000779918.1	GRASLND-239	1439	No protein	-	lncRNA	-	-
ENST00000779913.1	GRASLND-234	1436	No protein	-	lncRNA	-	-
ENST00000779912.1	GRASLND-233	1391	No protein	-	lncRNA	-	-
ENST00000779908.1	GRASLND-229	1377	No protein	-	lncRNA	-	-
ENST00000779909.1	GRASLND-230	1363	No protein	-	lncRNA	-	-
ENST00000779910.1	GRASLND-231	1278	No protein	-	lncRNA	-	-
ENST00000779907.1	GRASLND-228	1243	No protein	-	lncRNA	-	-
ENST00000779911.1	GRASLND-232	1240	No protein	-	lncRNA	-	-
ENST00000779916.1	GRASLND-237	1202	No protein	-	lncRNA	-	-
ENST00000779917.1	GRASLND-238	1168	No protein	-	lncRNA	-	-
ENST00000779915.1	GRASLND-236	1108	No protein	-	lncRNA	-	-
ENST00000655156.1	GRASLND-209	1107	No protein	-	lncRNA	-	-
ENST00000439208.2	GRASLND-205	808	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000426122.1	GRASLND-203	579	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 2,158 bps,

Version

ENST00000661763.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000661763.1 GRASLND-217

Summary

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Transcript: ENST00000661763.1 GRASLND-217

Summary

About Us

Get help

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