Transcript: ENST00000661471.1 VPS13B-DT-203

Description

VPS13B divergent transcript [Source:HGNC Symbol;Acc:HGNC:54375]

Gene Synonyms

OLC8

Location

Chromosome 8: 98,958,399-99,013,038 reverse strand.

About this transcript

This transcript has 3 exons and maps to 70 oligo probes.

Gene

This transcript is a product of gene ENSG00000253948.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000686056.3	VPS13B-DT-207	994	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000653552.1	VPS13B-DT-202	2836	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000664437.1	VPS13B-DT-205	2324	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000661471.1	VPS13B-DT-203	2124	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000663007.1	VPS13B-DT-204	1484	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000664472.4	VPS13B-DT-206	1360	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000721832.1	VPS13B-DT-223	730	No protein	-	lncRNA	-	-
ENST00000721824.1	VPS13B-DT-215	626	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000721829.1	VPS13B-DT-220	614	No protein	-	lncRNA	-	-
ENST00000721830.1	VPS13B-DT-221	593	No protein	-	lncRNA	-	-
ENST00000721827.1	VPS13B-DT-218	544	No protein	-	lncRNA	-	-
ENST00000721822.1	VPS13B-DT-213	534	No protein	-	lncRNA	-	-
ENST00000721818.1	VPS13B-DT-209	499	No protein	-	lncRNA	-	-
ENST00000721819.1	VPS13B-DT-210	494	No protein	-	lncRNA	-	-
ENST00000721820.1	VPS13B-DT-211	493	No protein	-	lncRNA	-	-
ENST00000721825.1	VPS13B-DT-216	487	No protein	-	lncRNA	-	-
ENST00000721831.1	VPS13B-DT-222	460	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000721826.1	VPS13B-DT-217	458	No protein	-	lncRNA	-	-
ENST00000521696.1	VPS13B-DT-201	380	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000721828.1	VPS13B-DT-219	376	No protein	-	lncRNA	-	-
ENST00000721823.1	VPS13B-DT-214	374	No protein	-	lncRNA	-	-
ENST00000689048.3	VPS13B-DT-208	357	No protein	-	lncRNA	-	-
ENST00000721821.1	VPS13B-DT-212	285	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 2,124 bps,

Version

ENST00000661471.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000661471.1 VPS13B-DT-203

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Transcript: ENST00000661471.1 VPS13B-DT-203

Summary

About Us

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