Transcript: ENST00000661443.1 LINC02241-232

Description

long intergenic non-protein coding RNA 2241 [Source:HGNC Symbol;Acc:HGNC:53126]

Location

Chromosome 5: 20,611,854-20,937,693 forward strand.

About this transcript

This transcript has 11 exons and maps to 323 oligo probes.

Gene

This transcript is a product of gene ENSG00000251629.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000657383.1	LINC02241-216	1543	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000660211.1	LINC02241-224	2017	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000660152.1	LINC02241-223	1983	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000666241.1	LINC02241-250	1935	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000655312.1	LINC02241-210	1892	No protein	-	lncRNA	-	-
ENST00000660596.1	LINC02241-228	1857	No protein	-	lncRNA	-	-
ENST00000662354.1	LINC02241-235	1847	No protein	-	lncRNA	-	-
ENST00000652820.1	LINC02241-204	1828	No protein	-	lncRNA	-	-
ENST00000666214.1	LINC02241-249	1819	No protein	-	lncRNA	-	-
ENST00000669525.1	LINC02241-264	1818	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000657737.1	LINC02241-217	1789	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000661443.1	LINC02241-232	1760	No protein	-	lncRNA	-	-
ENST00000668352.1	LINC02241-258	1758	No protein	-	lncRNA	-	-
ENST00000660427.1	LINC02241-226	1719	No protein	-	lncRNA	-	-
ENST00000663898.1	LINC02241-239	1705	No protein	-	lncRNA	-	-
ENST00000502427.5	LINC02241-201	1687	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000656233.1	LINC02241-213	1687	No protein	-	lncRNA	-	-
ENST00000657864.1	LINC02241-218	1672	No protein	-	lncRNA	-	-
ENST00000665750.1	LINC02241-248	1659	No protein	-	lncRNA	-	-
ENST00000667733.1	LINC02241-257	1640	No protein	-	lncRNA	-	-
ENST00000664874.1	LINC02241-242	1637	No protein	-	lncRNA	-	-
ENST00000668593.1	LINC02241-260	1625	No protein	-	lncRNA	-	-
ENST00000668363.1	LINC02241-259	1606	No protein	-	lncRNA	-	-
ENST00000664411.1	LINC02241-241	1604	No protein	-	lncRNA	-	-
ENST00000666246.1	LINC02241-252	1588	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000656809.1	LINC02241-214	1570	No protein	-	lncRNA	-	-
ENST00000659988.1	LINC02241-222	1488	No protein	-	lncRNA	-	-
ENST00000668829.1	LINC02241-261	1453	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000667230.1	LINC02241-254	1446	No protein	-	lncRNA	-	-
ENST00000665164.1	LINC02241-244	1442	No protein	-	lncRNA	-	-
ENST00000662453.1	LINC02241-236	1441	No protein	-	lncRNA	-	-
ENST00000663691.1	LINC02241-238	1420	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000667015.1	LINC02241-253	1408	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000662556.1	LINC02241-237	1397	No protein	-	lncRNA	-	-
ENST00000667696.1	LINC02241-256	1396	No protein	-	lncRNA	-	-
ENST00000660453.1	LINC02241-227	1377	No protein	-	lncRNA	-	-
ENST00000670749.1	LINC02241-265	1358	No protein	-	lncRNA	-	-
ENST00000671578.1	LINC02241-266	1354	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000659352.1	LINC02241-221	1352	No protein	-	lncRNA	-	-
ENST00000664930.1	LINC02241-243	1331	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000669262.1	LINC02241-263	1297	No protein	-	lncRNA	-	-
ENST00000655570.1	LINC02241-211	1293	No protein	-	lncRNA	-	-
ENST00000660411.1	LINC02241-225	1283	No protein	-	lncRNA	-	-
ENST00000661497.1	LINC02241-233	1268	No protein	-	lncRNA	-	-
ENST00000512688.2	LINC02241-202	1250	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000658934.1	LINC02241-219	1212	No protein	-	lncRNA	-	-
ENST00000666245.1	LINC02241-251	1192	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000665726.1	LINC02241-246	1183	No protein	-	lncRNA	-	-
ENST00000656908.1	LINC02241-215	1174	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000659281.1	LINC02241-220	1167	No protein	-	lncRNA	-	-
ENST00000654633.1	LINC02241-209	1158	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000661008.1	LINC02241-229	1150	No protein	-	lncRNA	-	-
ENST00000663927.1	LINC02241-240	1144	No protein	-	lncRNA	-	-
ENST00000669224.1	LINC02241-262	1061	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000654310.1	LINC02241-207	1011	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000665740.1	LINC02241-247	958	No protein	-	lncRNA	-	-
ENST00000655853.1	LINC02241-212	876	No protein	-	lncRNA	-	-
ENST00000654483.1	LINC02241-208	869	No protein	-	lncRNA	-	-
ENST00000765446.1	LINC02241-272	745	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000661226.2	LINC02241-230	717	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000765441.1	LINC02241-267	691	No protein	-	lncRNA	-	-
ENST00000765445.1	LINC02241-271	643	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000765454.1	LINC02241-280	639	No protein	-	lncRNA	-	-
ENST00000765461.1	LINC02241-287	621	No protein	-	lncRNA	-	-
ENST00000653395.1	LINC02241-205	614	No protein	-	lncRNA	-	-
ENST00000653469.1	LINC02241-206	607	No protein	-	lncRNA	-	-
ENST00000661358.1	LINC02241-231	604	No protein	-	lncRNA	-	-
ENST00000765451.1	LINC02241-277	577	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000765452.1	LINC02241-278	567	No protein	-	lncRNA	-	-
ENST00000765448.1	LINC02241-274	544	No protein	-	lncRNA	-	-
ENST00000662082.2	LINC02241-234	526	No protein	-	lncRNA	-	-
ENST00000765453.1	LINC02241-279	516	No protein	-	lncRNA	-	-
ENST00000765449.1	LINC02241-275	491	No protein	-	lncRNA	-	-
ENST00000665581.2	LINC02241-245	472	No protein	-	lncRNA	-	-
ENST00000765450.1	LINC02241-276	446	No protein	-	lncRNA	-	-
ENST00000514876.6	LINC02241-203	436	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000765460.1	LINC02241-286	432	No protein	-	lncRNA	-	-
ENST00000765462.1	LINC02241-288	427	No protein	-	lncRNA	-	-
ENST00000667653.2	LINC02241-255	423	No protein	-	lncRNA	-	-
ENST00000765456.1	LINC02241-282	415	No protein	-	lncRNA	-	-
ENST00000765457.1	LINC02241-283	379	No protein	-	lncRNA	-	-
ENST00000765458.1	LINC02241-284	378	No protein	-	lncRNA	-	-
ENST00000765455.1	LINC02241-281	377	No protein	-	lncRNA	-	-
ENST00000765443.1	LINC02241-269	367	No protein	-	lncRNA	-	-
ENST00000765447.1	LINC02241-273	367	No protein	-	lncRNA	-	-
ENST00000765444.1	LINC02241-270	329	No protein	-	lncRNA	-	-
ENST00000765442.1	LINC02241-268	300	No protein	-	lncRNA	-	-
ENST00000765459.1	LINC02241-285	287	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 11, Coding exons: 0, Transcript length: 1,760 bps,

Version

ENST00000661443.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000661443.1 LINC02241-232

Summary

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Transcript: ENST00000661443.1 LINC02241-232

Summary

About Us

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