Transcript: ENST00000661408.1 LINC02739-202

Description

long intergenic non-protein coding RNA 2739 [Source:HGNC Symbol;Acc:HGNC:54256]

Location

Chromosome 11: 59,560,298-59,566,283 reverse strand.

About this transcript

This transcript has 8 exons, is associated with 3068 variant alleles and maps to 681 oligo probes.

Gene

This transcript is a product of gene ENSG00000255008.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000661408.1	LINC02739-202	1482	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000685142.3	LINC02739-203	1582	No protein	-	lncRNA	-	-
ENST00000785246.1	LINC02739-206	1531	No protein	-	lncRNA	-	-
ENST00000691999.2	LINC02739-204	1521	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000785251.1	LINC02739-211	1158	No protein	-	lncRNA	-	-
ENST00000785247.1	LINC02739-207	1084	No protein	-	lncRNA	-	-
ENST00000533552.3	LINC02739-201	950	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000785250.1	LINC02739-210	807	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000785253.1	LINC02739-213	787	No protein	-	lncRNA	-	-
ENST00000785248.1	LINC02739-208	755	No protein	-	lncRNA	-	-
ENST00000785249.1	LINC02739-209	751	No protein	-	lncRNA	-	-
ENST00000785256.1	LINC02739-216	747	No protein	-	lncRNA	-	-
ENST00000785254.1	LINC02739-214	663	No protein	-	lncRNA	-	-
ENST00000785252.1	LINC02739-212	638	No protein	-	lncRNA	-	-
ENST00000785255.1	LINC02739-215	633	No protein	-	lncRNA	-	-
ENST00000702409.1	LINC02739-205	466	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 8, Coding exons: 0, Transcript length: 1,482 bps,

Version

ENST00000661408.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Annotation Attributes

QC splicing correct [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.

Transcript: ENST00000661408.1 LINC02739-202

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Transcript: ENST00000661408.1 LINC02739-202

Summary

About Us

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