Transcript: ENST00000661354.1 LINC01819-207

Description

long intergenic non-protein coding RNA 1819 [Source:HGNC Symbol;Acc:HGNC:52624]

Gene Synonyms

AC016735.2, KPRT4, LINC02590

Location

Chromosome 2: 43,031,800-43,039,556 reverse strand.

About this transcript

This transcript has 5 exons and maps to 181 oligo probes.

Gene

This transcript is a product of gene ENSG00000231826.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000705222.1	LINC01819-217	1405	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000668762.1	LINC01819-210	2393	No protein	-	lncRNA	-	-
ENST00000422351.5	LINC01819-201	2156	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000449766.7	LINC01819-203	1924	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000665782.1	LINC01819-209	1888	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000693026.1	LINC01819-214	1721	No protein	-	lncRNA	-	-
ENST00000661354.1	LINC01819-207	1718	No protein	-	lncRNA	-	-
ENST00000702635.1	LINC01819-215	1708	No protein	-	lncRNA	-	-
ENST00000425212.3	LINC01819-202	1634	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000656487.1	LINC01819-206	1594	No protein	-	lncRNA	-	-
ENST00000654608.1	LINC01819-205	1347	No protein	-	lncRNA	-	-
ENST00000686278.1	LINC01819-212	1342	No protein	-	lncRNA	-	-
ENST00000686714.1	LINC01819-213	1306	No protein	-	lncRNA	-	-
ENST00000662442.1	LINC01819-208	1301	No protein	-	lncRNA	-	-
ENST00000670864.1	LINC01819-211	1219	No protein	-	lncRNA	-	-
ENST00000705221.1	LINC01819-216	1211	No protein	-	lncRNA	-	-
ENST00000705224.1	LINC01819-219	884	No protein	-	lncRNA	-	-
ENST00000705223.1	LINC01819-218	547	No protein	-	lncRNA	-	-
ENST00000457457.2	LINC01819-204	237	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 1,718 bps,

Version

ENST00000661354.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000661354.1 LINC01819-207

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENST00000661354.1 LINC01819-207

Summary

About Us

Get help

Our sister sites

Follow us