Transcript: ENST00000661071.1 LINC02389-209

Description

long intergenic non-protein coding RNA 2389 [Source:HGNC Symbol;Acc:HGNC:53316]

Gene Synonyms

FLJ41278

Location

Chromosome 12: 64,883,703-64,990,474 forward strand.

About this transcript

This transcript has 5 exons and maps to 141 oligo probes.

Gene

This transcript is a product of gene ENSG00000255693.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000662789.1	LINC02389-211	1864	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000535058.2	LINC02389-201	3621	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000654555.1	LINC02389-207	3468	No protein	-	lncRNA	-	-
ENST00000655129.1	LINC02389-208	3195	No protein	-	lncRNA	-	-
ENST00000653464.1	LINC02389-205	2403	No protein	-	lncRNA	-	-
ENST00000649369.1	LINC02389-203	1869	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000661511.1	LINC02389-210	1772	No protein	-	lncRNA	-	-
ENST00000661071.1	LINC02389-209	1749	No protein	-	lncRNA	-	-
ENST00000665647.1	LINC02389-212	1682	No protein	-	lncRNA	-	-
ENST00000653132.1	LINC02389-204	1631	No protein	-	lncRNA	-	-
ENST00000667999.1	LINC02389-213	1628	No protein	-	lncRNA	-	-
ENST00000671328.1	LINC02389-214	1595	No protein	-	lncRNA	-	-
ENST00000653818.1	LINC02389-206	1582	No protein	-	lncRNA	-	-
ENST00000729967.1	LINC02389-215	1049	No protein	-	lncRNA	-	-
ENST00000729969.1	LINC02389-217	912	No protein	-	lncRNA	-	-
ENST00000729968.1	LINC02389-216	803	No protein	-	lncRNA	-	-
ENST00000540024.1	LINC02389-202	557	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 1,749 bps,

Version

ENST00000661071.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000661071.1 LINC02389-209

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Transcript: ENST00000661071.1 LINC02389-209

Summary

About Us

Get help

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