Transcript: ENST00000660855.2 LINC02236-206

Description

long intergenic non-protein coding RNA 2236 [Source:HGNC Symbol;Acc:HGNC:53107]

Gene Synonyms

RP11-332J15.1

Location

Chromosome 5: 6,773,203-6,786,792 forward strand.

About this transcript

This transcript has 5 exons and maps to 112 oligo probes.

Gene

This transcript is a product of gene ENSG00000251365.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000691419.2	LINC02236-209	2403	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000725828.1	LINC02236-212	1939	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000660855.2	LINC02236-206	1927	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000725827.1	LINC02236-211	1832	No protein	-	lncRNA	-	-
ENST00000725846.1	LINC02236-230	1691	No protein	-	lncRNA	-	-
ENST00000725831.1	LINC02236-215	1680	No protein	-	lncRNA	-	-
ENST00000725836.1	LINC02236-220	1513	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000725845.1	LINC02236-229	1497	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000725839.1	LINC02236-223	1474	No protein	-	lncRNA	-	-
ENST00000701164.1	LINC02236-210	1436	No protein	-	lncRNA	-	-
ENST00000725838.1	LINC02236-222	1421	No protein	-	lncRNA	-	-
ENST00000652281.2	LINC02236-205	1409	No protein	-	lncRNA	-	-
ENST00000725834.1	LINC02236-218	1302	No protein	-	lncRNA	-	-
ENST00000725829.1	LINC02236-213	1277	No protein	-	lncRNA	-	-
ENST00000725830.1	LINC02236-214	1243	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000725840.1	LINC02236-224	1232	No protein	-	lncRNA	-	-
ENST00000725837.1	LINC02236-221	1218	No protein	-	lncRNA	-	-
ENST00000649262.1	LINC02236-204	1199	No protein	-	lncRNA	-	-
ENST00000725842.1	LINC02236-226	1183	No protein	-	lncRNA	-	-
ENST00000725835.1	LINC02236-219	1168	No protein	-	lncRNA	-	-
ENST00000725833.1	LINC02236-217	1089	No protein	-	lncRNA	-	-
ENST00000725832.1	LINC02236-216	1080	No protein	-	lncRNA	-	-
ENST00000690700.1	LINC02236-208	1051	No protein	-	lncRNA	-	-
ENST00000725843.1	LINC02236-227	1023	No protein	-	lncRNA	-	-
ENST00000648399.1	LINC02236-203	972	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000688820.2	LINC02236-207	960	No protein	-	lncRNA	-	-
ENST00000725847.1	LINC02236-231	630	No protein	-	lncRNA	-	-
ENST00000506093.1	LINC02236-201	596	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000508881.1	LINC02236-202	552	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000725841.1	LINC02236-225	525	No protein	-	lncRNA	-	-
ENST00000725844.1	LINC02236-228	413	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 1,927 bps,

Version

ENST00000660855.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000660855.2 LINC02236-206

Summary

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Transcript: ENST00000660855.2 LINC02236-206

Summary

About Us

Get help

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