Transcript: ENST00000660852.2 LINC00881-213

Description

long intergenic non-protein coding RNA 881 [Source:HGNC Symbol;Acc:HGNC:48567]

Gene Synonyms

LIPTER

Location

Chromosome 3: 157,089,694-157,101,137 forward strand.

About this transcript

This transcript has 3 exons and maps to 184 oligo probes.

Gene

This transcript is a product of gene ENSG00000241135.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000460796.2	LINC00881-201	2301	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000487238.5	LINC00881-207	483	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000667900.2	LINC00881-218	3661	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000781925.1	LINC00881-262	2853	No protein	-	lncRNA	-	-
ENST00000781930.1	LINC00881-267	2726	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000781929.1	LINC00881-266	2675	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000668714.3	LINC00881-219	2519	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000781941.1	LINC00881-278	2462	No protein	-	lncRNA	-	-
ENST00000781677.1	LINC00881-258	2431	No protein	-	lncRNA	-	-
ENST00000494885.2	LINC00881-209	2263	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000781926.1	LINC00881-263	2188	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000467995.7	LINC00881-202	1904	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000666301.1	LINC00881-217	1810	No protein	-	lncRNA	-	-
ENST00000654819.1	LINC00881-211	1674	No protein	-	lncRNA	-	-
ENST00000781931.1	LINC00881-268	1607	No protein	-	lncRNA	-	-
ENST00000691958.2	LINC00881-221	1599	No protein	-	lncRNA	-	-
ENST00000474477.8	LINC00881-204	1559	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000781678.1	LINC00881-259	1406	No protein	-	lncRNA	-	-
ENST00000781653.1	LINC00881-234	1393	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000781667.1	LINC00881-248	1384	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000781927.1	LINC00881-264	1343	No protein	-	lncRNA	-	-
ENST00000781660.1	LINC00881-241	1258	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000781937.1	LINC00881-274	1225	No protein	-	lncRNA	-	-
ENST00000781655.1	LINC00881-236	1221	No protein	-	lncRNA	-	-
ENST00000781676.1	LINC00881-257	1220	No protein	-	lncRNA	-	-
ENST00000781666.1	LINC00881-247	1203	No protein	-	lncRNA	-	-
ENST00000781659.1	LINC00881-240	1197	No protein	-	lncRNA	-	-
ENST00000781654.1	LINC00881-235	1104	No protein	-	lncRNA	-	-
ENST00000781932.1	LINC00881-269	1093	No protein	-	lncRNA	-	-
ENST00000781645.1	LINC00881-226	1092	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000781663.1	LINC00881-244	1075	No protein	-	lncRNA	-	-
ENST00000781675.1	LINC00881-256	1064	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000781658.1	LINC00881-239	1060	No protein	-	lncRNA	-	-
ENST00000665841.2	LINC00881-216	1057	No protein	-	lncRNA	-	-
ENST00000781657.1	LINC00881-238	1052	No protein	-	lncRNA	-	-
ENST00000781661.1	LINC00881-242	1028	No protein	-	lncRNA	-	-
ENST00000701678.1	LINC00881-222	1021	No protein	-	lncRNA	-	-
ENST00000654705.1	LINC00881-210	1020	No protein	-	lncRNA	-	-
ENST00000781656.1	LINC00881-237	1007	No protein	-	lncRNA	-	-
ENST00000471719.2	LINC00881-203	1004	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000781664.1	LINC00881-245	1002	No protein	-	lncRNA	-	-
ENST00000660852.2	LINC00881-213	1000	No protein	-	lncRNA	-	-
ENST00000781665.1	LINC00881-246	993	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000781943.1	LINC00881-280	986	No protein	-	lncRNA	-	-
ENST00000781672.1	LINC00881-253	977	No protein	-	lncRNA	-	-
ENST00000781642.1	LINC00881-223	958	No protein	-	lncRNA	-	-
ENST00000781652.1	LINC00881-233	943	No protein	-	lncRNA	-	-
ENST00000781647.1	LINC00881-228	913	No protein	-	lncRNA	-	-
ENST00000654835.1	LINC00881-212	908	No protein	-	lncRNA	-	-
ENST00000781668.1	LINC00881-249	886	No protein	-	lncRNA	-	-
ENST00000781648.1	LINC00881-229	883	No protein	-	lncRNA	-	-
ENST00000781644.1	LINC00881-225	821	No protein	-	lncRNA	-	-
ENST00000781643.1	LINC00881-224	815	No protein	-	lncRNA	-	-
ENST00000781649.1	LINC00881-230	789	No protein	-	lncRNA	-	-
ENST00000781646.1	LINC00881-227	750	No protein	-	lncRNA	-	-
ENST00000665438.2	LINC00881-215	742	No protein	-	lncRNA	-	-
ENST00000488040.6	LINC00881-208	704	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000781938.1	LINC00881-275	700	No protein	-	lncRNA	-	-
ENST00000781662.1	LINC00881-243	658	No protein	-	lncRNA	-	-
ENST00000781942.1	LINC00881-279	620	No protein	-	lncRNA	-	-
ENST00000781669.1	LINC00881-250	601	No protein	-	lncRNA	-	-
ENST00000781651.1	LINC00881-232	596	No protein	-	lncRNA	-	-
ENST00000670208.2	LINC00881-220	591	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000663887.2	LINC00881-214	588	No protein	-	lncRNA	-	-
ENST00000781940.1	LINC00881-277	552	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000781671.1	LINC00881-252	542	No protein	-	lncRNA	-	-
ENST00000781933.1	LINC00881-270	534	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000781679.1	LINC00881-260	530	No protein	-	lncRNA	-	-
ENST00000781680.1	LINC00881-261	513	No protein	-	lncRNA	-	-
ENST00000781936.1	LINC00881-273	499	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000781673.1	LINC00881-254	495	No protein	-	lncRNA	-	-
ENST00000781939.1	LINC00881-276	487	No protein	-	lncRNA	-	-
ENST00000781928.1	LINC00881-265	471	No protein	-	lncRNA	-	-
ENST00000781674.1	LINC00881-255	466	No protein	-	lncRNA	-	-
ENST00000781934.1	LINC00881-271	435	No protein	-	lncRNA	-	-
ENST00000781935.1	LINC00881-272	433	No protein	-	lncRNA	-	-
ENST00000475102.1	LINC00881-205	384	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000781650.1	LINC00881-231	384	No protein	-	lncRNA	-	-
ENST00000480817.1	LINC00881-206	320	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000781670.1	LINC00881-251	281	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,000 bps,

Version

ENST00000660852.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000660852.2 LINC00881-213

Summary

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Transcript: ENST00000660852.2 LINC00881-213

Summary

About Us

Get help

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