Transcript: ENST00000660330.1 LINC01091-210

Description

long intergenic non-protein coding RNA 1091 [Source:HGNC Symbol;Acc:HGNC:27721]

Location

Chromosome 4: 123,650,034-123,930,783 forward strand.

About this transcript

This transcript has 7 exons and maps to 279 oligo probes.

Gene

This transcript is a product of gene ENSG00000249464.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000664622.1	LINC01091-216	1580	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000514823.5	LINC01091-203	5262	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000515769.1	LINC01091-204	2204	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000684936.1	LINC01091-235	1693	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000688140.1	LINC01091-238	1587	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000661368.1	LINC01091-211	1515	No protein	-	lncRNA	-	-
ENST00000691879.1	LINC01091-243	1502	No protein	-	lncRNA	-	-
ENST00000686783.1	LINC01091-236	1494	No protein	-	lncRNA	-	-
ENST00000692159.1	LINC01091-244	1477	No protein	-	lncRNA	-	-
ENST00000700999.1	LINC01091-245	1457	No protein	-	lncRNA	-	-
ENST00000688429.1	LINC01091-239	1457	No protein	-	lncRNA	-	-
ENST00000688939.2	LINC01091-240	1452	No protein	-	lncRNA	-	-
ENST00000670311.3	LINC01091-228	1451	No protein	-	lncRNA	-	-
ENST00000666328.1	LINC01091-218	1450	No protein	-	lncRNA	-	-
ENST00000687307.1	LINC01091-237	1448	No protein	-	lncRNA	-	-
ENST00000669505.1	LINC01091-226	1431	No protein	-	lncRNA	-	-
ENST00000660330.1	LINC01091-210	1380	No protein	-	lncRNA	-	-
ENST00000689676.1	LINC01091-241	1375	No protein	-	lncRNA	-	-
ENST00000666015.1	LINC01091-217	1373	No protein	-	lncRNA	-	-
ENST00000657410.2	LINC01091-208	1372	No protein	-	lncRNA	-	-
ENST00000511919.6	LINC01091-202	1347	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000670628.1	LINC01091-230	1302	No protein	-	lncRNA	-	-
ENST00000508111.6	LINC01091-201	1269	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000655571.1	LINC01091-205	1242	No protein	-	lncRNA	-	-
ENST00000666490.1	LINC01091-219	1150	No protein	-	lncRNA	-	-
ENST00000662928.1	LINC01091-214	1137	No protein	-	lncRNA	-	-
ENST00000656388.1	LINC01091-207	1136	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000671655.1	LINC01091-234	1089	No protein	-	lncRNA	-	-
ENST00000655892.1	LINC01091-206	1084	No protein	-	lncRNA	-	-
ENST00000668501.1	LINC01091-224	1078	No protein	-	lncRNA	-	-
ENST00000669502.1	LINC01091-225	1060	No protein	-	lncRNA	-	-
ENST00000663714.1	LINC01091-215	1058	No protein	-	lncRNA	-	-
ENST00000701014.1	LINC01091-246	1044	No protein	-	lncRNA	-	-
ENST00000669933.1	LINC01091-227	1043	No protein	-	lncRNA	-	-
ENST00000671094.2	LINC01091-231	1041	No protein	-	lncRNA	-	-
ENST00000666756.1	LINC01091-220	981	No protein	-	lncRNA	-	-
ENST00000668255.1	LINC01091-223	961	No protein	-	lncRNA	-	-
ENST00000662262.1	LINC01091-213	944	No protein	-	lncRNA	-	-
ENST00000659080.1	LINC01091-209	907	No protein	-	lncRNA	-	-
ENST00000690721.1	LINC01091-242	877	No protein	-	lncRNA	-	-
ENST00000667528.1	LINC01091-222	857	No protein	-	lncRNA	-	-
ENST00000661665.1	LINC01091-212	855	No protein	-	lncRNA	-	-
ENST00000667041.1	LINC01091-221	848	No protein	-	lncRNA	-	-
ENST00000671119.1	LINC01091-232	815	No protein	-	lncRNA	-	-
ENST00000671260.1	LINC01091-233	778	No protein	-	lncRNA	-	-
ENST00000670449.1	LINC01091-229	644	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 7, Coding exons: 0, Transcript length: 1,380 bps,

Version

ENST00000660330.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000660330.1 LINC01091-210

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Transcript: ENST00000660330.1 LINC01091-210

Summary

About Us

Get help

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