Transcript: ENST00000660222.1 LINC00348-209

Description

long intergenic non-protein coding RNA 348 [Source:HGNC Symbol;Acc:HGNC:42658]

Location

Chromosome 13: 71,015,065-71,168,416 forward strand.

About this transcript

This transcript has 4 exons and maps to 208 oligo probes.

Gene

This transcript is a product of gene ENSG00000226846.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000655045.1	LINC00348-204	1210	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000656251.1	LINC00348-206	1239	No protein	-	lncRNA	-	-
ENST00000662353.1	LINC00348-211	1207	No protein	-	lncRNA	-	-
ENST00000671240.1	LINC00348-218	1194	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000664823.1	LINC00348-213	1167	No protein	-	lncRNA	-	-
ENST00000665820.1	LINC00348-214	1166	No protein	-	lncRNA	-	-
ENST00000671477.1	LINC00348-219	1166	No protein	-	lncRNA	-	-
ENST00000658800.1	LINC00348-207	1159	No protein	-	lncRNA	-	-
ENST00000667632.1	LINC00348-216	1139	No protein	-	lncRNA	-	-
ENST00000660222.1	LINC00348-209	1101	No protein	-	lncRNA	-	-
ENST00000663997.1	LINC00348-212	1076	No protein	-	lncRNA	-	-
ENST00000659244.1	LINC00348-208	1066	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000655546.1	LINC00348-205	1060	No protein	-	lncRNA	-	-
ENST00000666881.1	LINC00348-215	1053	No protein	-	lncRNA	-	-
ENST00000428761.2	LINC00348-201	1044	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000661523.1	LINC00348-210	992	No protein	-	lncRNA	-	-
ENST00000653160.1	LINC00348-202	917	No protein	-	lncRNA	-	-
ENST00000653878.1	LINC00348-203	809	No protein	-	lncRNA	-	-
ENST00000779639.1	LINC00348-220	700	No protein	-	lncRNA	-	-
ENST00000779640.1	LINC00348-221	700	No protein	-	lncRNA	-	-
ENST00000668650.1	LINC00348-217	580	No protein	-	lncRNA	-	-
ENST00000779641.1	LINC00348-222	383	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,101 bps,

Version

ENST00000660222.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000660222.1 LINC00348-209

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Transcript: ENST00000660222.1 LINC00348-209

Summary

About Us

Get help

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