Transcript: ENST00000659247.1 LINC01505-216

Description

long intergenic non-protein coding RNA 1505 [Source:HGNC Symbol;Acc:HGNC:51186]

Gene Synonyms

RP11-308N19.1

Location

Chromosome 9: 106,450,717-106,604,803 forward strand.

About this transcript

This transcript has 3 exons and maps to 156 oligo probes.

Gene

This transcript is a product of gene ENSG00000234323.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000637185.1	LINC01505-207	1540	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000637046.1	LINC01505-206	4266	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000636028.2	LINC01505-205	2310	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000788718.1	LINC01505-283	2207	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000444985.7	LINC01505-204	2058	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000685173.1	LINC01505-231	2006	No protein	-	lncRNA	-	-
ENST00000788775.1	LINC01505-338	1863	No protein	-	lncRNA	-	-
ENST00000788728.1	LINC01505-293	1820	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000788736.1	LINC01505-301	1771	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000692913.1	LINC01505-239	1761	No protein	-	lncRNA	-	-
ENST00000655864.1	LINC01505-210	1720	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000435485.5	LINC01505-203	1686	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000687669.3	LINC01505-234	1658	No protein	-	lncRNA	-	-
ENST00000788729.1	LINC01505-294	1655	No protein	-	lncRNA	-	-
ENST00000690853.1	LINC01505-237	1649	No protein	-	lncRNA	-	-
ENST00000670335.1	LINC01505-230	1632	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000788777.1	LINC01505-340	1623	No protein	-	lncRNA	-	-
ENST00000664703.1	LINC01505-220	1622	No protein	-	lncRNA	-	-
ENST00000663508.2	LINC01505-217	1600	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000664212.1	LINC01505-219	1581	No protein	-	lncRNA	-	-
ENST00000788790.1	LINC01505-353	1566	No protein	-	lncRNA	-	-
ENST00000788794.1	LINC01505-357	1539	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000691180.1	LINC01505-238	1529	No protein	-	lncRNA	-	-
ENST00000658295.1	LINC01505-213	1528	No protein	-	lncRNA	-	-
ENST00000663705.3	LINC01505-218	1511	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000659198.2	LINC01505-215	1506	No protein	-	lncRNA	-	-
ENST00000665119.1	LINC01505-222	1483	No protein	-	lncRNA	-	-
ENST00000788776.1	LINC01505-339	1482	No protein	-	lncRNA	-	-
ENST00000656689.1	LINC01505-212	1477	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000653693.1	LINC01505-208	1468	No protein	-	lncRNA	-	-
ENST00000664960.2	LINC01505-221	1465	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000655266.1	LINC01505-209	1434	No protein	-	lncRNA	-	-
ENST00000666690.2	LINC01505-226	1431	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000689497.2	LINC01505-236	1418	No protein	-	lncRNA	-	-
ENST00000425709.3	LINC01505-202	1413	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000788781.1	LINC01505-344	1401	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000788714.1	LINC01505-279	1369	No protein	-	lncRNA	-	-
ENST00000668842.1	LINC01505-228	1355	No protein	-	lncRNA	-	-
ENST00000668979.1	LINC01505-229	1352	No protein	-	lncRNA	-	-
ENST00000658723.2	LINC01505-214	1350	No protein	-	lncRNA	-	-
ENST00000685899.1	LINC01505-232	1340	No protein	-	lncRNA	-	-
ENST00000659247.1	LINC01505-216	1332	No protein	-	lncRNA	-	-
ENST00000788717.1	LINC01505-282	1320	No protein	-	lncRNA	-	-
ENST00000788700.1	LINC01505-265	1290	No protein	-	lncRNA	-	-
ENST00000788711.1	LINC01505-276	1276	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000788707.1	LINC01505-272	1253	No protein	-	lncRNA	-	-
ENST00000788774.1	LINC01505-337	1236	No protein	-	lncRNA	-	-
ENST00000788710.1	LINC01505-275	1218	No protein	-	lncRNA	-	-
ENST00000788680.1	LINC01505-245	1217	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000788712.1	LINC01505-277	1216	No protein	-	lncRNA	-	-
ENST00000788699.1	LINC01505-264	1208	No protein	-	lncRNA	-	-
ENST00000788709.1	LINC01505-274	1197	No protein	-	lncRNA	-	-
ENST00000693637.2	LINC01505-240	1184	No protein	-	lncRNA	-	-
ENST00000788704.1	LINC01505-269	1184	No protein	-	lncRNA	-	-
ENST00000788716.1	LINC01505-281	1174	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000796723.1	LINC01505-370	1173	No protein	-	lncRNA	-	-
ENST00000788684.1	LINC01505-249	1146	No protein	-	lncRNA	-	-
ENST00000788742.1	LINC01505-307	1144	No protein	-	lncRNA	-	-
ENST00000788705.1	LINC01505-270	1142	No protein	-	lncRNA	-	-
ENST00000788735.1	LINC01505-300	1135	No protein	-	lncRNA	-	-
ENST00000788703.1	LINC01505-268	1132	No protein	-	lncRNA	-	-
ENST00000788706.1	LINC01505-271	1129	No protein	-	lncRNA	-	-
ENST00000665889.1	LINC01505-224	1123	No protein	-	lncRNA	-	-
ENST00000788708.1	LINC01505-273	1104	No protein	-	lncRNA	-	-
ENST00000788695.1	LINC01505-260	1100	No protein	-	lncRNA	-	-
ENST00000788701.1	LINC01505-266	1099	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000688893.1	LINC01505-235	1085	No protein	-	lncRNA	-	-
ENST00000700793.1	LINC01505-241	1085	No protein	-	lncRNA	-	-
ENST00000788734.1	LINC01505-299	1083	No protein	-	lncRNA	-	-
ENST00000788731.1	LINC01505-296	1080	No protein	-	lncRNA	-	-
ENST00000788757.1	LINC01505-322	1074	No protein	-	lncRNA	-	-
ENST00000788733.1	LINC01505-298	1073	No protein	-	lncRNA	-	-
ENST00000788688.1	LINC01505-253	1072	No protein	-	lncRNA	-	-
ENST00000788715.1	LINC01505-280	1061	No protein	-	lncRNA	-	-
ENST00000788741.1	LINC01505-306	1058	No protein	-	lncRNA	-	-
ENST00000788713.1	LINC01505-278	1052	No protein	-	lncRNA	-	-
ENST00000788698.1	LINC01505-263	1047	No protein	-	lncRNA	-	-
ENST00000788795.1	LINC01505-358	1047	No protein	-	lncRNA	-	-
ENST00000788702.1	LINC01505-267	1023	No protein	-	lncRNA	-	-
ENST00000788732.1	LINC01505-297	1015	No protein	-	lncRNA	-	-
ENST00000788693.1	LINC01505-258	1014	No protein	-	lncRNA	-	-
ENST00000788730.1	LINC01505-295	1001	No protein	-	lncRNA	-	-
ENST00000788686.1	LINC01505-251	984	No protein	-	lncRNA	-	-
ENST00000788799.1	LINC01505-362	977	No protein	-	lncRNA	-	-
ENST00000788739.1	LINC01505-304	970	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000788692.1	LINC01505-257	957	No protein	-	lncRNA	-	-
ENST00000788691.1	LINC01505-256	951	No protein	-	lncRNA	-	-
ENST00000788697.1	LINC01505-262	947	No protein	-	lncRNA	-	-
ENST00000788690.1	LINC01505-255	943	No protein	-	lncRNA	-	-
ENST00000788694.1	LINC01505-259	920	No protein	-	lncRNA	-	-
ENST00000788759.1	LINC01505-324	920	No protein	-	lncRNA	-	-
ENST00000788681.1	LINC01505-246	911	No protein	-	lncRNA	-	-
ENST00000701643.1	LINC01505-243	902	No protein	-	lncRNA	-	-
ENST00000788683.1	LINC01505-248	896	No protein	-	lncRNA	-	-
ENST00000788786.1	LINC01505-349	895	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000788793.1	LINC01505-356	888	No protein	-	lncRNA	-	-
ENST00000788687.1	LINC01505-252	886	No protein	-	lncRNA	-	-
ENST00000788770.1	LINC01505-333	885	No protein	-	lncRNA	-	-
ENST00000788773.1	LINC01505-336	881	No protein	-	lncRNA	-	-
ENST00000411451.3	LINC01505-201	873	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000788766.1	LINC01505-329	856	No protein	-	lncRNA	-	-
ENST00000788764.1	LINC01505-327	848	No protein	-	lncRNA	-	-
ENST00000788769.1	LINC01505-332	843	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000788792.1	LINC01505-355	843	No protein	-	lncRNA	-	-
ENST00000788749.1	LINC01505-314	840	No protein	-	lncRNA	-	-
ENST00000788685.1	LINC01505-250	838	No protein	-	lncRNA	-	-
ENST00000788758.1	LINC01505-323	836	No protein	-	lncRNA	-	-
ENST00000788724.1	LINC01505-289	834	No protein	-	lncRNA	-	-
ENST00000667292.2	LINC01505-227	830	No protein	-	lncRNA	-	-
ENST00000788689.1	LINC01505-254	829	No protein	-	lncRNA	-	-
ENST00000788780.1	LINC01505-343	828	No protein	-	lncRNA	-	-
ENST00000788782.1	LINC01505-345	828	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000788771.1	LINC01505-334	813	No protein	-	lncRNA	-	-
ENST00000788765.1	LINC01505-328	812	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000788737.1	LINC01505-302	806	No protein	-	lncRNA	-	-
ENST00000788696.1	LINC01505-261	792	No protein	-	lncRNA	-	-
ENST00000788743.1	LINC01505-308	790	No protein	-	lncRNA	-	-
ENST00000788723.1	LINC01505-288	787	No protein	-	lncRNA	-	-
ENST00000788797.1	LINC01505-360	784	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000788721.1	LINC01505-286	782	No protein	-	lncRNA	-	-
ENST00000788800.1	LINC01505-363	776	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000788768.1	LINC01505-331	768	No protein	-	lncRNA	-	-
ENST00000788788.1	LINC01505-351	763	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000788791.1	LINC01505-354	758	No protein	-	lncRNA	-	-
ENST00000788787.1	LINC01505-350	752	No protein	-	lncRNA	-	-
ENST00000788682.1	LINC01505-247	747	No protein	-	lncRNA	-	-
ENST00000793810.1	LINC01505-369	741	No protein	-	lncRNA	-	-
ENST00000788744.1	LINC01505-309	740	No protein	-	lncRNA	-	-
ENST00000788725.1	LINC01505-290	735	No protein	-	lncRNA	-	-
ENST00000788751.1	LINC01505-316	726	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000656069.1	LINC01505-211	724	No protein	-	lncRNA	-	-
ENST00000788760.1	LINC01505-325	720	No protein	-	lncRNA	-	-
ENST00000793806.1	LINC01505-365	717	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000788722.1	LINC01505-287	709	No protein	-	lncRNA	-	-
ENST00000788785.1	LINC01505-348	706	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000788762.1	LINC01505-326	705	No protein	-	lncRNA	-	-
ENST00000788720.1	LINC01505-285	703	No protein	-	lncRNA	-	-
ENST00000788748.1	LINC01505-313	702	No protein	-	lncRNA	-	-
ENST00000788738.1	LINC01505-303	686	No protein	-	lncRNA	-	-
ENST00000793805.1	LINC01505-364	676	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000788727.1	LINC01505-292	667	No protein	-	lncRNA	-	-
ENST00000788767.1	LINC01505-330	665	No protein	-	lncRNA	-	-
ENST00000686957.1	LINC01505-233	664	No protein	-	lncRNA	-	-
ENST00000788746.1	LINC01505-311	664	No protein	-	lncRNA	-	-
ENST00000665947.1	LINC01505-225	653	No protein	-	lncRNA	-	-
ENST00000788753.1	LINC01505-318	650	No protein	-	lncRNA	-	-
ENST00000665373.1	LINC01505-223	646	No protein	-	lncRNA	-	-
ENST00000788772.1	LINC01505-335	646	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000788789.1	LINC01505-352	640	No protein	-	lncRNA	-	-
ENST00000788719.1	LINC01505-284	628	No protein	-	lncRNA	-	-
ENST00000793808.1	LINC01505-367	622	No protein	-	lncRNA	-	-
ENST00000788750.1	LINC01505-315	618	No protein	-	lncRNA	-	-
ENST00000788755.1	LINC01505-320	614	No protein	-	lncRNA	-	-
ENST00000788752.1	LINC01505-317	596	No protein	-	lncRNA	-	-
ENST00000788798.1	LINC01505-361	587	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000788783.1	LINC01505-346	576	No protein	-	lncRNA	-	-
ENST00000788784.1	LINC01505-347	574	No protein	-	lncRNA	-	-
ENST00000793809.1	LINC01505-368	567	No protein	-	lncRNA	-	-
ENST00000788747.1	LINC01505-312	548	No protein	-	lncRNA	-	-
ENST00000788754.1	LINC01505-319	538	No protein	-	lncRNA	-	-
ENST00000788756.1	LINC01505-321	535	No protein	-	lncRNA	-	-
ENST00000793807.1	LINC01505-366	521	No protein	-	lncRNA	-	-
ENST00000788778.1	LINC01505-341	517	No protein	-	lncRNA	-	-
ENST00000788745.1	LINC01505-310	508	No protein	-	lncRNA	-	-
ENST00000788779.1	LINC01505-342	487	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000788740.1	LINC01505-305	474	No protein	-	lncRNA	-	-
ENST00000701865.1	LINC01505-244	473	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000788796.1	LINC01505-359	449	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000788726.1	LINC01505-291	427	No protein	-	lncRNA	-	-
ENST00000701249.2	LINC01505-242	367	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,332 bps,

Version

ENST00000659247.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000659247.1 LINC01505-216

Summary

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Transcript: ENST00000659247.1 LINC01505-216

Summary

About Us

Get help

Our sister sites

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