Transcript: ENST00000659098.1 LINC01102-212

Description

long intergenic non-protein coding RNA 1102 [Source:HGNC Symbol;Acc:HGNC:27165]

Location

Chromosome 2: 104,434,459-104,512,758 forward strand.

About this transcript

This transcript has 4 exons and maps to 199 oligo probes.

Gene

This transcript is a product of gene ENSG00000235597.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000690368.2	LINC01102-236	1405	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000451400.2	LINC01102-204	3830	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000659788.1	LINC01102-213	2516	No protein	-	lncRNA	-	-
ENST00000667436.1	LINC01102-230	2492	No protein	-	lncRNA	-	-
ENST00000666200.1	LINC01102-226	2429	No protein	-	lncRNA	-	-
ENST00000429464.1	LINC01102-202	2128	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000664762.1	LINC01102-222	1967	No protein	-	lncRNA	-	-
ENST00000414442.2	LINC01102-201	1909	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000658704.1	LINC01102-208	1899	No protein	-	lncRNA	-	-
ENST00000657293.2	LINC01102-206	1878	No protein	-	lncRNA	-	-
ENST00000691178.2	LINC01102-237	1823	No protein	-	lncRNA	-	-
ENST00000652812.1	LINC01102-205	1768	No protein	-	lncRNA	-	-
ENST00000759184.1	LINC01102-246	1757	No protein	-	lncRNA	-	-
ENST00000691584.1	LINC01102-238	1749	No protein	-	lncRNA	-	-
ENST00000670569.1	LINC01102-233	1737	No protein	-	lncRNA	-	-
ENST00000759179.1	LINC01102-241	1711	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000660572.1	LINC01102-215	1671	No protein	-	lncRNA	-	-
ENST00000670643.1	LINC01102-234	1649	No protein	-	lncRNA	-	-
ENST00000759178.1	LINC01102-240	1632	No protein	-	lncRNA	-	-
ENST00000447380.2	LINC01102-203	1591	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000759185.1	LINC01102-247	1566	No protein	-	lncRNA	-	-
ENST00000667477.1	LINC01102-231	1549	No protein	-	lncRNA	-	-
ENST00000759177.1	LINC01102-239	1525	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000666592.1	LINC01102-228	1483	No protein	-	lncRNA	-	-
ENST00000664680.1	LINC01102-221	1477	No protein	-	lncRNA	-	-
ENST00000660711.1	LINC01102-216	1462	No protein	-	lncRNA	-	-
ENST00000658921.1	LINC01102-210	1457	No protein	-	lncRNA	-	-
ENST00000657656.1	LINC01102-207	1420	No protein	-	lncRNA	-	-
ENST00000666546.1	LINC01102-227	1418	No protein	-	lncRNA	-	-
ENST00000669146.1	LINC01102-232	1417	No protein	-	lncRNA	-	-
ENST00000664788.1	LINC01102-223	1412	No protein	-	lncRNA	-	-
ENST00000658830.1	LINC01102-209	1382	No protein	-	lncRNA	-	-
ENST00000660280.1	LINC01102-214	1326	No protein	-	lncRNA	-	-
ENST00000759181.1	LINC01102-243	1273	No protein	-	lncRNA	-	-
ENST00000659047.1	LINC01102-211	1269	No protein	-	lncRNA	-	-
ENST00000663107.1	LINC01102-220	1254	No protein	-	lncRNA	-	-
ENST00000665228.2	LINC01102-225	1205	No protein	-	lncRNA	-	-
ENST00000759180.1	LINC01102-242	1148	No protein	-	lncRNA	-	-
ENST00000670863.1	LINC01102-235	1137	No protein	-	lncRNA	-	-
ENST00000759183.1	LINC01102-245	1076	No protein	-	lncRNA	-	-
ENST00000759182.1	LINC01102-244	1074	No protein	-	lncRNA	-	-
ENST00000665210.1	LINC01102-224	1064	No protein	-	lncRNA	-	-
ENST00000662445.1	LINC01102-219	1040	No protein	-	lncRNA	-	-
ENST00000659098.1	LINC01102-212	1035	No protein	-	lncRNA	-	-
ENST00000661607.1	LINC01102-217	1018	No protein	-	lncRNA	-	-
ENST00000666748.1	LINC01102-229	996	No protein	-	lncRNA	-	-
ENST00000662105.1	LINC01102-218	714	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,035 bps,

Version

ENST00000659098.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000659098.1 LINC01102-212

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Transcript: ENST00000659098.1 LINC01102-212

Summary

About Us

Get help

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