Transcript: ENST00000658977.1 LINC00592-206

Description

long intergenic non-protein coding RNA 592 [Source:HGNC Symbol;Acc:HGNC:27474]

Location

Chromosome 12: 52,210,899-52,223,752 forward strand.

About this transcript

This transcript has 3 exons and maps to 141 oligo probes.

Gene

This transcript is a product of gene ENSG00000258279.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000640420.2	LINC00592-202	781	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000668621.1	LINC00592-213	1311	No protein	-	lncRNA	-	-
ENST00000656394.1	LINC00592-204	1216	No protein	-	lncRNA	-	-
ENST00000669247.1	LINC00592-214	1213	No protein	-	lncRNA	-	-
ENST00000656951.1	LINC00592-205	1213	No protein	-	lncRNA	-	-
ENST00000668114.1	LINC00592-212	1147	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000665995.1	LINC00592-209	1137	No protein	-	lncRNA	-	-
ENST00000669936.1	LINC00592-215	1052	No protein	-	lncRNA	-	-
ENST00000549830.2	LINC00592-201	1044	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000806699.1	LINC00592-217	933	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000663735.1	LINC00592-208	909	No protein	-	lncRNA	-	-
ENST00000667981.1	LINC00592-211	892	No protein	-	lncRNA	-	-
ENST00000667021.1	LINC00592-210	876	No protein	-	lncRNA	-	-
ENST00000806698.1	LINC00592-216	867	No protein	-	lncRNA	-	-
ENST00000806700.1	LINC00592-218	836	No protein	-	lncRNA	-	-
ENST00000653127.1	LINC00592-203	770	No protein	-	lncRNA	-	-
ENST00000661213.1	LINC00592-207	761	No protein	-	lncRNA	-	-
ENST00000806701.1	LINC00592-219	627	No protein	-	lncRNA	-	-
ENST00000658977.1	LINC00592-206	542	No protein	-	lncRNA	-	-
ENST00000806703.1	LINC00592-221	505	No protein	-	lncRNA	-	-
ENST00000806702.1	LINC00592-220	478	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 542 bps,

Version

ENST00000658977.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000658977.1 LINC00592-206

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Transcript: ENST00000658977.1 LINC00592-206

Summary

About Us

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