Transcript: ENST00000658913.1 SNHG27-210

Description

small nucleolar RNA host gene 27 [Source:HGNC Symbol;Acc:HGNC:53481]

Location

Chromosome 4: 131,750,082-131,774,718 forward strand.

About this transcript

This transcript has 3 exons and maps to 239 oligo probes.

Gene

This transcript is a product of gene ENSG00000251676.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000657220.1	SNHG27-208	938	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000664137.1	SNHG27-214	1690	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000657219.1	SNHG27-207	1447	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000658913.1	SNHG27-210	1052	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000756855.1	SNHG27-229	850	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000756856.1	SNHG27-230	806	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000756845.1	SNHG27-219	765	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000657961.1	SNHG27-209	759	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000654278.1	SNHG27-205	749	No protein	-	lncRNA	-	-
ENST00000756843.1	SNHG27-217	744	No protein	-	lncRNA	-	-
ENST00000756847.1	SNHG27-221	703	No protein	-	lncRNA	-	-
ENST00000664412.2	SNHG27-215	699	No protein	-	lncRNA	-	-
ENST00000756848.1	SNHG27-222	683	No protein	-	lncRNA	-	-
ENST00000756849.1	SNHG27-223	683	No protein	-	lncRNA	-	-
ENST00000662181.2	SNHG27-211	682	No protein	-	lncRNA	-	-
ENST00000514222.2	SNHG27-203	669	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000756851.1	SNHG27-225	643	No protein	-	lncRNA	-	-
ENST00000655257.1	SNHG27-206	623	No protein	-	lncRNA	-	-
ENST00000756846.1	SNHG27-220	621	No protein	-	lncRNA	-	-
ENST00000756844.1	SNHG27-218	611	No protein	-	lncRNA	-	-
ENST00000653283.1	SNHG27-204	593	No protein	-	lncRNA	-	-
ENST00000663369.1	SNHG27-212	593	No protein	-	lncRNA	-	-
ENST00000756854.1	SNHG27-228	592	No protein	-	lncRNA	-	-
ENST00000667068.1	SNHG27-216	589	No protein	-	lncRNA	-	-
ENST00000756850.1	SNHG27-224	541	No protein	-	lncRNA	-	-
ENST00000756852.1	SNHG27-226	505	No protein	-	lncRNA	-	-
ENST00000507933.1	SNHG27-202	491	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000663882.1	SNHG27-213	489	No protein	-	lncRNA	-	-
ENST00000756853.1	SNHG27-227	406	No protein	-	lncRNA	-	-
ENST00000507332.1	SNHG27-201	401	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000756857.1	SNHG27-231	246	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,052 bps,

Version

ENST00000658913.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000658913.1 SNHG27-210

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENST00000658913.1 SNHG27-210

Summary

About Us

Get help

Our sister sites

Follow us