Transcript: ENST00000658884.2 LINC00659-206

Description

long intergenic non-protein coding RNA 659 [Source:HGNC Symbol;Acc:HGNC:44316]

Location

Chromosome 20: 62,773,174-62,777,067 reverse strand.

About this transcript

This transcript has 3 exons and maps to 243 oligo probes.

Gene

This transcript is a product of gene ENSG00000228705.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000689171.2	LINC00659-209	2255	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000412500.3	LINC00659-201	2089	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000764060.1	LINC00659-221	1988	No protein	-	lncRNA	-	-
ENST00000658884.2	LINC00659-206	1864	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000653007.2	LINC00659-202	1724	No protein	-	lncRNA	-	-
ENST00000764059.1	LINC00659-220	1414	No protein	-	lncRNA	-	-
ENST00000667589.2	LINC00659-207	1362	No protein	-	lncRNA	-	-
ENST00000764050.1	LINC00659-211	1298	No protein	-	lncRNA	-	-
ENST00000764054.1	LINC00659-215	1293	No protein	-	lncRNA	-	-
ENST00000658688.3	LINC00659-205	1156	No protein	-	lncRNA	-	-
ENST00000655940.2	LINC00659-203	1149	No protein	-	lncRNA	-	-
ENST00000764057.1	LINC00659-218	1147	No protein	-	lncRNA	-	-
ENST00000764058.1	LINC00659-219	1011	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000657741.2	LINC00659-204	816	No protein	-	lncRNA	-	-
ENST00000764055.1	LINC00659-216	772	No protein	-	lncRNA	-	-
ENST00000764053.1	LINC00659-214	759	No protein	-	lncRNA	-	-
ENST00000764052.1	LINC00659-213	733	No protein	-	lncRNA	-	-
ENST00000701965.2	LINC00659-210	709	No protein	-	lncRNA	-	-
ENST00000764061.1	LINC00659-222	698	No protein	-	lncRNA	-	-
ENST00000764056.1	LINC00659-217	664	No protein	-	lncRNA	-	-
ENST00000667978.4	LINC00659-208	624	No protein	-	lncRNA	-	-
ENST00000764062.1	LINC00659-223	618	No protein	-	lncRNA	-	-
ENST00000764051.1	LINC00659-212	596	No protein	-	lncRNA	-	-
ENST00000764063.1	LINC00659-224	528	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,864 bps,

Version

ENST00000658884.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000658884.2 LINC00659-206

Summary

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Transcript: ENST00000658884.2 LINC00659-206

Summary

About Us

Get help

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