Transcript: ENST00000658537.1 LINC02517-207

Description

long intergenic non-protein coding RNA 2517 [Source:HGNC Symbol;Acc:HGNC:53506]

Location

Chromosome 4: 8,324,336-8,327,165 forward strand.

About this transcript

This transcript has 2 exons.

Gene

This transcript is a product of gene ENSG00000249145.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000829910.1	LINC02517-217	1404	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000829911.1	LINC02517-218	2418	No protein	-	lncRNA	-	-
ENST00000700929.1	LINC02517-214	1803	No protein	-	lncRNA	-	-
ENST00000661956.1	LINC02517-210	1644	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000690289.2	LINC02517-212	1438	No protein	-	lncRNA	-	-
ENST00000646635.2	LINC02517-203	1387	No protein	-	lncRNA	-	-
ENST00000701523.2	LINC02517-216	1367	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000829912.1	LINC02517-219	1308	No protein	-	lncRNA	-	-
ENST00000701442.1	LINC02517-215	1136	No protein	-	lncRNA	-	-
ENST00000829916.1	LINC02517-223	1070	No protein	-	lncRNA	-	-
ENST00000829920.1	LINC02517-227	1011	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000829919.1	LINC02517-226	1010	No protein	-	lncRNA	-	-
ENST00000829917.1	LINC02517-224	1006	No protein	-	lncRNA	-	-
ENST00000658537.1	LINC02517-207	1003	No protein	-	lncRNA	-	-
ENST00000661538.1	LINC02517-209	967	No protein	-	lncRNA	-	-
ENST00000829914.1	LINC02517-221	921	No protein	-	lncRNA	-	-
ENST00000829913.1	LINC02517-220	856	No protein	-	lncRNA	-	-
ENST00000653648.4	LINC02517-204	851	No protein	-	lncRNA	-	-
ENST00000657733.2	LINC02517-205	835	No protein	-	lncRNA	-	-
ENST00000829918.1	LINC02517-225	811	No protein	-	lncRNA	-	-
ENST00000671202.2	LINC02517-211	790	No protein	-	lncRNA	-	-
ENST00000829915.1	LINC02517-222	781	No protein	-	lncRNA	-	-
ENST00000829921.1	LINC02517-228	754	No protein	-	lncRNA	-	-
ENST00000503186.4	LINC02517-201	735	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000660291.1	LINC02517-208	728	No protein	-	lncRNA	-	-
ENST00000829923.1	LINC02517-230	666	No protein	-	lncRNA	-	-
ENST00000657851.2	LINC02517-206	660	No protein	-	lncRNA	-	-
ENST00000509453.3	LINC02517-202	653	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000829922.1	LINC02517-229	620	No protein	-	lncRNA	-	-
ENST00000692221.1	LINC02517-213	526	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 1,003 bps,

Version

ENST00000658537.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000658537.1 LINC02517-207

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Transcript: ENST00000658537.1 LINC02517-207

Summary

About Us

Get help

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