Transcript: ENST00000658471.1 LINC01968-215

Description

long intergenic non-protein coding RNA 1968 [Source:HGNC Symbol;Acc:HGNC:52794]

Location

Chromosome 3: 194,708,442-194,749,955 forward strand.

About this transcript

This transcript has 7 exons and maps to 154 oligo probes.

Gene

This transcript is a product of gene ENSG00000237222.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000667646.1	LINC01968-230	1038	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000423318.1	LINC01968-202	3647	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000716474.1	LINC01968-244	3196	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000841009.1	LINC01968-249	2589	No protein	-	lncRNA	-	-
ENST00000841013.1	LINC01968-253	2434	No protein	-	lncRNA	-	-
ENST00000841017.1	LINC01968-257	2000	No protein	-	lncRNA	-	-
ENST00000668747.1	LINC01968-231	1563	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000670880.1	LINC01968-242	1520	No protein	-	lncRNA	-	-
ENST00000664066.1	LINC01968-224	1519	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000716475.1	LINC01968-245	1513	No protein	-	lncRNA	-	-
ENST00000653914.1	LINC01968-209	1512	No protein	-	lncRNA	-	-
ENST00000654504.1	LINC01968-211	1464	No protein	-	lncRNA	-	-
ENST00000662913.1	LINC01968-222	1460	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000660286.1	LINC01968-219	1411	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000670673.1	LINC01968-240	1396	No protein	-	lncRNA	-	-
ENST00000669158.1	LINC01968-234	1394	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000664076.1	LINC01968-225	1374	No protein	-	lncRNA	-	-
ENST00000669157.1	LINC01968-233	1314	No protein	-	lncRNA	-	-
ENST00000655373.1	LINC01968-212	1298	No protein	-	lncRNA	-	-
ENST00000658821.1	LINC01968-217	1291	No protein	-	lncRNA	-	-
ENST00000841023.1	LINC01968-263	1271	No protein	-	lncRNA	-	-
ENST00000671408.1	LINC01968-243	1210	No protein	-	lncRNA	-	-
ENST00000666554.1	LINC01968-228	1189	No protein	-	lncRNA	-	-
ENST00000841019.1	LINC01968-259	1181	No protein	-	lncRNA	-	-
ENST00000670809.1	LINC01968-241	1159	No protein	-	lncRNA	-	-
ENST00000841010.1	LINC01968-250	1140	No protein	-	lncRNA	-	-
ENST00000669350.1	LINC01968-235	1099	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000841011.1	LINC01968-251	1098	No protein	-	lncRNA	-	-
ENST00000841006.1	LINC01968-246	992	No protein	-	lncRNA	-	-
ENST00000669045.1	LINC01968-232	988	No protein	-	lncRNA	-	-
ENST00000657492.1	LINC01968-213	960	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000658471.1	LINC01968-215	943	No protein	-	lncRNA	-	-
ENST00000658495.1	LINC01968-216	921	No protein	-	lncRNA	-	-
ENST00000654487.1	LINC01968-210	919	No protein	-	lncRNA	-	-
ENST00000841024.1	LINC01968-264	912	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000670519.2	LINC01968-238	894	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000841016.1	LINC01968-256	873	No protein	-	lncRNA	-	-
ENST00000666540.1	LINC01968-227	830	No protein	-	lncRNA	-	-
ENST00000653615.2	LINC01968-207	818	No protein	-	lncRNA	-	-
ENST00000841027.1	LINC01968-267	816	No protein	-	lncRNA	-	-
ENST00000662703.1	LINC01968-220	811	No protein	-	lncRNA	-	-
ENST00000841012.1	LINC01968-252	798	No protein	-	lncRNA	-	-
ENST00000841015.1	LINC01968-255	776	No protein	-	lncRNA	-	-
ENST00000841025.1	LINC01968-265	773	No protein	-	lncRNA	-	-
ENST00000666967.1	LINC01968-229	769	No protein	-	lncRNA	-	-
ENST00000653545.1	LINC01968-206	767	No protein	-	lncRNA	-	-
ENST00000670468.1	LINC01968-237	760	No protein	-	lncRNA	-	-
ENST00000658464.1	LINC01968-214	759	No protein	-	lncRNA	-	-
ENST00000841022.1	LINC01968-262	746	No protein	-	lncRNA	-	-
ENST00000670592.1	LINC01968-239	723	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000653661.1	LINC01968-208	692	No protein	-	lncRNA	-	-
ENST00000662904.1	LINC01968-221	680	No protein	-	lncRNA	-	-
ENST00000841008.1	LINC01968-248	661	No protein	-	lncRNA	-	-
ENST00000841021.1	LINC01968-261	615	No protein	-	lncRNA	-	-
ENST00000660104.1	LINC01968-218	613	No protein	-	lncRNA	-	-
ENST00000669492.1	LINC01968-236	613	No protein	-	lncRNA	-	-
ENST00000841026.1	LINC01968-266	586	No protein	-	lncRNA	-	-
ENST00000664371.1	LINC01968-226	583	No protein	-	lncRNA	-	-
ENST00000663443.1	LINC01968-223	564	No protein	-	lncRNA	-	-
ENST00000439479.1	LINC01968-203	556	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000415410.1	LINC01968-201	549	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000841014.1	LINC01968-254	500	No protein	-	lncRNA	-	-
ENST00000841018.1	LINC01968-258	438	No protein	-	lncRNA	-	-
ENST00000455796.1	LINC01968-205	432	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000454508.1	LINC01968-204	407	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000841007.1	LINC01968-247	391	No protein	-	lncRNA	-	-
ENST00000841020.1	LINC01968-260	367	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 7, Coding exons: 0, Transcript length: 943 bps,

Version

ENST00000658471.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000658471.1 LINC01968-215

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Transcript: ENST00000658471.1 LINC01968-215

Summary

About Us

Get help

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