Transcript: ENST00000658338.1 LINC01446-213

Description

long intergenic non-protein coding RNA 1446 [Source:HGNC Symbol;Acc:HGNC:50773]

Gene Synonyms

FLJ45974

Location

Chromosome 7: 53,770,701-53,811,942 reverse strand.

About this transcript

This transcript has 4 exons and maps to 76 oligo probes.

Gene

This transcript is a product of gene ENSG00000205628.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000663138.3	LINC01446-223	2327	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000380970.2	LINC01446-201	3484	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000765736.1	LINC01446-233	2367	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000668489.1	LINC01446-228	2261	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000670902.1	LINC01446-231	2113	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000656885.2	LINC01446-212	2065	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000765745.1	LINC01446-242	2004	No protein	-	lncRNA	-	-
ENST00000663872.1	LINC01446-225	1898	No protein	-	lncRNA	-	-
ENST00000660945.2	LINC01446-218	1846	No protein	-	lncRNA	-	-
ENST00000651858.1	LINC01446-205	1790	No protein	-	lncRNA	-	-
ENST00000765741.1	LINC01446-238	1750	No protein	-	lncRNA	-	-
ENST00000765738.1	LINC01446-235	1691	No protein	-	lncRNA	-	-
ENST00000659250.1	LINC01446-214	1662	No protein	-	lncRNA	-	-
ENST00000652104.1	LINC01446-208	1589	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000665927.1	LINC01446-226	1527	No protein	-	lncRNA	-	-
ENST00000662931.2	LINC01446-222	1508	No protein	-	lncRNA	-	-
ENST00000661502.1	LINC01446-220	1489	No protein	-	lncRNA	-	-
ENST00000669638.1	LINC01446-229	1479	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000666213.1	LINC01446-227	1466	No protein	-	lncRNA	-	-
ENST00000659794.1	LINC01446-216	1437	No protein	-	lncRNA	-	-
ENST00000670507.1	LINC01446-230	1425	No protein	-	lncRNA	-	-
ENST00000765737.1	LINC01446-234	1423	No protein	-	lncRNA	-	-
ENST00000652440.1	LINC01446-209	1416	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000651506.1	LINC01446-204	1385	No protein	-	lncRNA	-	-
ENST00000663312.1	LINC01446-224	1373	No protein	-	lncRNA	-	-
ENST00000660413.1	LINC01446-217	1360	No protein	-	lncRNA	-	-
ENST00000658338.1	LINC01446-213	1350	No protein	-	lncRNA	-	-
ENST00000662259.1	LINC01446-221	1347	No protein	-	lncRNA	-	-
ENST00000654050.1	LINC01446-210	1303	No protein	-	lncRNA	-	-
ENST00000659481.1	LINC01446-215	1279	No protein	-	lncRNA	-	-
ENST00000656718.1	LINC01446-211	1276	No protein	-	lncRNA	-	-
ENST00000650830.1	LINC01446-202	1271	No protein	-	lncRNA	-	-
ENST00000670945.1	LINC01446-232	1261	No protein	-	lncRNA	-	-
ENST00000660958.1	LINC01446-219	1257	No protein	-	lncRNA	-	-
ENST00000651951.1	LINC01446-206	1012	No protein	-	lncRNA	-	-
ENST00000651244.1	LINC01446-203	967	No protein	-	lncRNA	-	-
ENST00000765744.1	LINC01446-241	885	No protein	-	lncRNA	-	-
ENST00000765742.1	LINC01446-239	864	No protein	-	lncRNA	-	-
ENST00000765740.1	LINC01446-237	827	No protein	-	lncRNA	-	-
ENST00000765739.1	LINC01446-236	779	No protein	-	lncRNA	-	-
ENST00000652029.1	LINC01446-207	767	No protein	-	lncRNA	-	-
ENST00000765743.1	LINC01446-240	727	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,350 bps,

Version

ENST00000658338.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000658338.1 LINC01446-213

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Transcript: ENST00000658338.1 LINC01446-213

Summary

About Us

Get help

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