Transcript: ENST00000658159.2 LINC00923-218

Description

long intergenic non-protein coding RNA 923 [Source:HGNC Symbol;Acc:HGNC:28088]

Location

Chromosome 15: 97,338,814-97,522,026 reverse strand.

About this transcript

This transcript has 4 exons and maps to 179 oligo probes.

Gene

This transcript is a product of gene ENSG00000251209.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000740435.1	LINC00923-236	1250	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000664171.1	LINC00923-224	4453	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000671366.2	LINC00923-230	3327	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000647870.1	LINC00923-210	3268	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000671187.1	LINC00923-229	3174	No protein	-	lncRNA	-	-
ENST00000618064.2	LINC00923-207	2446	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000666698.1	LINC00923-225	2439	No protein	-	lncRNA	-	-
ENST00000658446.1	LINC00923-219	2272	No protein	-	lncRNA	-	-
ENST00000653612.2	LINC00923-211	2208	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000658159.2	LINC00923-218	2180	No protein	-	lncRNA	-	-
ENST00000655088.2	LINC00923-213	2157	No protein	-	lncRNA	-	-
ENST00000740469.1	LINC00923-270	2148	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000740458.1	LINC00923-259	2082	No protein	-	lncRNA	-	-
ENST00000701095.2	LINC00923-231	2079	No protein	-	lncRNA	-	-
ENST00000503768.6	LINC00923-201	2036	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000740473.1	LINC00923-274	1976	No protein	-	lncRNA	-	-
ENST00000740475.1	LINC00923-276	1976	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000740474.1	LINC00923-275	1952	No protein	-	lncRNA	-	-
ENST00000740499.1	LINC00923-300	1858	No protein	-	lncRNA	-	-
ENST00000740501.1	LINC00923-301	1855	No protein	-	lncRNA	-	-
ENST00000658901.1	LINC00923-220	1735	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000740439.1	LINC00923-240	1733	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000558621.2	LINC00923-204	1726	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000740477.1	LINC00923-278	1725	No protein	-	lncRNA	-	-
ENST00000740476.1	LINC00923-277	1722	No protein	-	lncRNA	-	-
ENST00000740478.1	LINC00923-279	1615	No protein	-	lncRNA	-	-
ENST00000740462.1	LINC00923-263	1614	No protein	-	lncRNA	-	-
ENST00000740470.1	LINC00923-271	1541	No protein	-	lncRNA	-	-
ENST00000740444.1	LINC00923-245	1503	No protein	-	lncRNA	-	-
ENST00000740438.1	LINC00923-239	1485	No protein	-	lncRNA	-	-
ENST00000653998.2	LINC00923-212	1484	No protein	-	lncRNA	-	-
ENST00000740479.1	LINC00923-280	1483	No protein	-	lncRNA	-	-
ENST00000664000.1	LINC00923-222	1461	No protein	-	lncRNA	-	-
ENST00000503874.3	LINC00923-202	1460	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000740480.1	LINC00923-281	1435	No protein	-	lncRNA	-	-
ENST00000740442.1	LINC00923-243	1428	No protein	-	lncRNA	-	-
ENST00000715391.1	LINC00923-233	1410	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000740445.1	LINC00923-246	1406	No protein	-	lncRNA	-	-
ENST00000740448.1	LINC00923-249	1393	No protein	-	lncRNA	-	-
ENST00000740441.1	LINC00923-242	1373	No protein	-	lncRNA	-	-
ENST00000715390.1	LINC00923-232	1364	No protein	-	lncRNA	-	-
ENST00000740450.1	LINC00923-251	1353	No protein	-	lncRNA	-	-
ENST00000715695.1	LINC00923-235	1311	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000740483.1	LINC00923-284	1304	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000740446.1	LINC00923-247	1288	No protein	-	lncRNA	-	-
ENST00000664109.1	LINC00923-223	1260	No protein	-	lncRNA	-	-
ENST00000740449.1	LINC00923-250	1245	No protein	-	lncRNA	-	-
ENST00000740488.1	LINC00923-289	1241	No protein	-	lncRNA	-	-
ENST00000662202.1	LINC00923-221	1237	No protein	-	lncRNA	-	-
ENST00000740461.1	LINC00923-262	1234	No protein	-	lncRNA	-	-
ENST00000740440.1	LINC00923-241	1232	No protein	-	lncRNA	-	-
ENST00000657749.2	LINC00923-216	1229	No protein	-	lncRNA	-	-
ENST00000740453.1	LINC00923-254	1229	No protein	-	lncRNA	-	-
ENST00000740447.1	LINC00923-248	1223	No protein	-	lncRNA	-	-
ENST00000740489.1	LINC00923-290	1217	No protein	-	lncRNA	-	-
ENST00000669932.1	LINC00923-227	1215	No protein	-	lncRNA	-	-
ENST00000740443.1	LINC00923-244	1215	No protein	-	lncRNA	-	-
ENST00000740454.1	LINC00923-255	1192	No protein	-	lncRNA	-	-
ENST00000740451.1	LINC00923-252	1191	No protein	-	lncRNA	-	-
ENST00000740436.1	LINC00923-237	1189	No protein	-	lncRNA	-	-
ENST00000614972.4	LINC00923-205	1181	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000740490.1	LINC00923-291	1177	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000668613.1	LINC00923-226	1174	No protein	-	lncRNA	-	-
ENST00000740456.1	LINC00923-257	1152	No protein	-	lncRNA	-	-
ENST00000740486.1	LINC00923-287	1147	No protein	-	lncRNA	-	-
ENST00000740457.1	LINC00923-258	1145	No protein	-	lncRNA	-	-
ENST00000655922.2	LINC00923-214	1136	No protein	-	lncRNA	-	-
ENST00000740455.1	LINC00923-256	1103	No protein	-	lncRNA	-	-
ENST00000715392.1	LINC00923-234	1095	No protein	-	lncRNA	-	-
ENST00000656917.1	LINC00923-215	1068	No protein	-	lncRNA	-	-
ENST00000740452.1	LINC00923-253	1022	No protein	-	lncRNA	-	-
ENST00000658023.1	LINC00923-217	1005	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000740437.1	LINC00923-238	975	No protein	-	lncRNA	-	-
ENST00000615399.1	LINC00923-206	932	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000740459.1	LINC00923-260	864	No protein	-	lncRNA	-	-
ENST00000740465.1	LINC00923-266	862	No protein	-	lncRNA	-	-
ENST00000670719.2	LINC00923-228	845	No protein	-	lncRNA	-	-
ENST00000740481.1	LINC00923-282	824	No protein	-	lncRNA	-	-
ENST00000740467.1	LINC00923-268	709	No protein	-	lncRNA	-	-
ENST00000740498.1	LINC00923-299	697	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000740463.1	LINC00923-264	695	No protein	-	lncRNA	-	-
ENST00000740468.1	LINC00923-269	692	No protein	-	lncRNA	-	-
ENST00000740460.1	LINC00923-261	667	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000740482.1	LINC00923-283	655	No protein	-	lncRNA	-	-
ENST00000740466.1	LINC00923-267	648	No protein	-	lncRNA	-	-
ENST00000740464.1	LINC00923-265	647	No protein	-	lncRNA	-	-
ENST00000740492.1	LINC00923-293	643	No protein	-	lncRNA	-	-
ENST00000740471.1	LINC00923-272	611	No protein	-	lncRNA	-	-
ENST00000740497.1	LINC00923-298	577	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000740502.1	LINC00923-302	551	No protein	-	lncRNA	-	-
ENST00000740493.1	LINC00923-294	539	No protein	-	lncRNA	-	-
ENST00000740472.1	LINC00923-273	515	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000619015.1	LINC00923-208	505	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000621777.1	LINC00923-209	503	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000740494.1	LINC00923-295	487	No protein	-	lncRNA	-	-
ENST00000740495.1	LINC00923-296	469	No protein	-	lncRNA	-	-
ENST00000740496.1	LINC00923-297	456	No protein	-	lncRNA	-	-
ENST00000740491.1	LINC00923-292	454	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000740485.1	LINC00923-286	445	No protein	-	lncRNA	-	-
ENST00000740487.1	LINC00923-288	375	No protein	-	lncRNA	-	-
ENST00000558179.1	LINC00923-203	359	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000740484.1	LINC00923-285	314	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 2,180 bps,

Version

ENST00000658159.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000658159.2 LINC00923-218

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Transcript: ENST00000658159.2 LINC00923-218

Summary

About Us

Get help

Our sister sites

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